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The map label for this gene is yfkH [H]

Identifier: 190894365

GI number: 190894365

Start: 23479

End: 24555

Strand: Reverse

Name: yfkH [H]

Synonym: RHECIAT_PC0000025

Alternate gene names: 190894365

Gene position: 24555-23479 (Counterclockwise)

Preceding gene: 190894366

Following gene: 190894364

Centisome position: 2.25

GC content: 62.67

Gene sequence:

>1077_bases
ATGGCAGACGGGCTTCACCTCAAGAGGTTCCCAACCGCCGCTCTGATAATGGCCGCTGCGGTCGGCGCGCTCGCGTTGTT
AGAGGCGCGGCAGCAAGCTTCGATGGCTCCCGGGAAACCCGGCCGGGCCGATGACGATCATGGGCGCAGCGCCGCCGTGC
CTGAGGCCATTCCGCTCAGCGGCCTTCGCGACGTGTTCTGGCGTGTCTATCATGAAGTACTGGATGACCGGATCACGCTG
ATTGCCGCCGGCGTGACCTTCTATCTGCTGCTCGCGCTGTTTCCCGCTTTGGCGGCACTCGTCTCTCTCTACGGGCTGGT
TGCCGATCCGGTCACGATATCAGAACATCTGCGGGAGCTCGCCGGCCTCCTGCCGCCCGGCGCCTTCGATCTCATCGCCG
ATCAGATCAAGGCGCTGGTCGAAAAGCGCGAGAGCACCCTCGGCATCACCTTCTTCGTCGGCCTTGCCATCGCGCTCTGG
AGCACGCATAGCGGCACGCTGGCGATCTTCGACGCGATGAACGTCGCCTATGAGGAGAATGAGAAGCGTGGCTTCCTCCG
CCTGAACCTGACCGGCCTCTGCTTCACCTTGTGCGCGATGGTCTTTGCGGTCGTCATGGTGGTGCTCGTCGGCGTCATGC
CGGTCATGCTGTCTTATCTCTGGCTCGACCAGTTCAAGGAGCACCTGGCCCTTCTCTTGAGGTGGCCGCTGCTGCTCTTT
ATTGTCGCGGTGGCCGTGACATTGGTCTACCGCTTCGGCCCCAGCCGTGAGCCTGCCAGGATCCGATGGATGACATGGGG
GGCGGCGCTGACGACGCTCGCCTGGGCCGTCATGTCGATCGGCTTTTCCTTCTACCTCGATCATTTTGCCAATTACAACG
CGACCTACGGCACGCTCGGTGCGCTGATCGGCTTCCTCATCTGGATCTGGCTGTCCGTCGTCATTCTCATCGTCGGGGCG
GAACTCAACGCCGAGCTCGAGCATCAGACGGCACGCGACACGACGACGGGATATCCGTTGCCGATGGGCGCGCGCGGTGC
CTATGTCGCGGACACTTTGGGCGAGACCGTAAACTGA

Upstream 100 bases:

>100_bases
CGGACCCCTTCCCTCTTCCGAATCTTCGCCAGGAAGCAACGGCTTGCATCCTTTAGCGACACTCGGGCGTTATCCACTCA
GCAAATCGGAGGATAAGGTA

Downstream 100 bases:

>100_bases
CCGTCAAGCAGCATTGTCGATGACTGCTCCCCGGCTGTGATTTTGATGTACCTTATCTCTCGGCAGGCTCGATAGAGGAG
ACGATCATGACCGCCCCGCA

Product: putative ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MADGLHLKRFPTAALIMAAAVGALALLEARQQASMAPGKPGRADDDHGRSAAVPEAIPLSGLRDVFWRVYHEVLDDRITL
IAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELAGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALW
STHSGTLAIFDAMNVAYEENEKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLLLF
IVAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLGALIGFLIWIWLSVVILIVGA
ELNAELEHQTARDTTTGYPLPMGARGAYVADTLGETVN

Sequences:

>Translated_358_residues
MADGLHLKRFPTAALIMAAAVGALALLEARQQASMAPGKPGRADDDHGRSAAVPEAIPLSGLRDVFWRVYHEVLDDRITL
IAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELAGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALW
STHSGTLAIFDAMNVAYEENEKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLLLF
IVAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLGALIGFLIWIWLSVVILIVGA
ELNAELEHQTARDTTTGYPLPMGARGAYVADTLGETVN
>Mature_357_residues
ADGLHLKRFPTAALIMAAAVGALALLEARQQASMAPGKPGRADDDHGRSAAVPEAIPLSGLRDVFWRVYHEVLDDRITLI
AAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELAGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALWS
THSGTLAIFDAMNVAYEENEKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLLLFI
VAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLGALIGFLIWIWLSVVILIVGAE
LNAELEHQTARDTTTGYPLPMGARGAYVADTLGETVN

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 39065; Mature: 38934

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGLHLKRFPTAALIMAAAVGALALLEARQQASMAPGKPGRADDDHGRSAAVPEAIPLS
CCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
GLRDVFWRVYHEVLDDRITLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALWSTHSGTLAIFDAMNVAYEEN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCC
EKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLLLF
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLG
HHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALIGFLIWIWLSVVILIVGAELNAELEHQTARDTTTGYPLPMGARGAYVADTLGETVN
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
ADGLHLKRFPTAALIMAAAVGALALLEARQQASMAPGKPGRADDDHGRSAAVPEAIPLS
CCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
GLRDVFWRVYHEVLDDRITLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALWSTHSGTLAIFDAMNVAYEEN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCC
EKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLLLF
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLG
HHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALIGFLIWIWLSVVILIVGAELNAELEHQTARDTTTGYPLPMGARGAYVADTLGETVN
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]