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The map label for this gene is recR [H]

Identifier: 190571171

GI number: 190571171

Start: 841295

End: 841888

Strand: Direct

Name: recR [H]

Synonym: WPa_0769

Alternate gene names: 190571171

Gene position: 841295-841888 (Clockwise)

Preceding gene: 190571170

Following gene: 190571172

Centisome position: 56.75

GC content: 35.86

Gene sequence:

>594_bases
ATGAACATTAATATAAAGAATTTAGTTCATGCTTTTTCTAAATTGCCAAGTTTAGGTCCATCATCATCACGAAGATTAGT
TATACATTTGCTCCAGAACAAAGAGAGAGTCATGCTACCGCTTGCATCTTTGATTAGAGAGCTAGCGGATCTTATAATAG
AGTGCAAAATTTGTGGAAACCTAGATACTAAATCGCCGTGTTCTATTTGTACTAACCCAAAGCGTGACACCAAGTTAATG
TGTGTAGTAGAAGAATTGGGTGATCTATGGGCATTTGAAAAAGGGAATATATATTCAGGTATGTATCATGTTTTGGGTGG
AAGGCTATCAGCAATAAATGGCATAGGTCCAAAAGAACTGAATCTTGATAACATTCCCAAAAGAGTTACAGAATTTAAAA
TTGAAGAGGTCATTATTGCAATCAATCCGACATTAGAAGGCCAAGTTACTGCGCAATATATAATTGAATTGCTAAAGAAT
TCGAATGTAAAAATATCGCGCCTTGCTTGTGGTATACCGATAGGTGGAGAAATTGACTACCTAGATGAAGGGACTCTGAA
GATAGCGCTTACTTCAAGACAGGATATTAAATAA

Upstream 100 bases:

>100_bases
TAAAAAAAGTGGGAAATCTTTTTCATAGCCAATCAAACTAAGCTTTCTTTACGAAAGGTTTGATGTTATCATTTTATAAA
CTATATCCTGAATTTGTTAA

Downstream 100 bases:

>100_bases
TATTCCATTTCTTCTGAGCAACATACTTTAAAAATACTGTAACATACTTCAGCCTAGAAACTTGCTTGCTAATTGAAAAT
ATTATACATTTAAATATGGT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNINIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDTKSPCSICTNPKRDTKLM
CVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKN
SNVKISRLACGIPIGGEIDYLDEGTLKIALTSRQDIK

Sequences:

>Translated_197_residues
MNINIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDTKSPCSICTNPKRDTKLM
CVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKN
SNVKISRLACGIPIGGEIDYLDEGTLKIALTSRQDIK
>Mature_197_residues
MNINIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGNLDTKSPCSICTNPKRDTKLM
CVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKELNLDNIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKN
SNVKISRLACGIPIGGEIDYLDEGTLKIALTSRQDIK

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=194, Percent_Identity=39.6907216494845, Blast_Score=154, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21809; Mature: 21809

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGN
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHEEHHCCCC
LDTKSPCSICTNPKRDTKLMCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKEL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCCCCC
NLDNIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDY
CCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE
LDEGTLKIALTSRQDIK
ECCCEEEEEECCCCCCC
>Mature Secondary Structure
MNINIKNLVHAFSKLPSLGPSSSRRLVIHLLQNKERVMLPLASLIRELADLIIECKICGN
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHEEHHCCCC
LDTKSPCSICTNPKRDTKLMCVVEELGDLWAFEKGNIYSGMYHVLGGRLSAINGIGPKEL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCCCCC
NLDNIPKRVTEFKIEEVIIAINPTLEGQVTAQYIIELLKNSNVKISRLACGIPIGGEIDY
CCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE
LDEGTLKIALTSRQDIK
ECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA