| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190571108
Identifier: 190571108
GI number: 190571108
Start: 773247
End: 774074
Strand: Direct
Name: 190571108
Synonym: WPa_0706
Alternate gene names: NA
Gene position: 773247-774074 (Clockwise)
Preceding gene: 190571107
Following gene: 190571111
Centisome position: 52.16
GC content: 34.18
Gene sequence:
>828_bases ATGCTTAATTCTTTGTTAGTATTTGATATTGAAACTATACCAGATGTAAATTCCTGCAAGAATTTACTAAATATTAGTGA TGATAGCAGTGTAGAAGAAAAGAGGAACGCATTAACAAAATATCATCTTGAAATAACAAACGGGCAAAACTCTTTTCTGC GTCAGCCCTTCCACCTTGTTGTAGTCATTAGTTTTTTACTTTGTAATATAACACGCCAGAGCGGTTATGAAATGTTCACA CTACAAGAAATAAGATCTGGAGGCACAGTAAACTCCAATGAAAAAGAGCTAGTAAAGGGATTTTTTAACTACATATCAGA GAAAAAGCCAAGACTAGTTTCGTTCAATGGACGCACTTTTGATATACCGGTACTGAAGTACCGTGCTATGGTTCATGGCA TTCAAGCAGAATATTTTCACAAAGCTGGCGATAAGTGGAATAGTTACAATCAGAGGTACAGTAGTGATTGGCATTGTGAT TTGCTTGAATCTCTCTCTGATTTTGGAGCTTCTGCAAGAATGAAGATGAACGAAGTTTGCGCAGCATTTAATCTTCCCGG TAAGATTGGAGTTGATGGTTCACAAGTTATGGACTTATATGATAGTGGCAAAATACAAGAGATTCGCGATTATTGTGAAA CAGATGTGATTAACACTTATTTGATTTATTTGAGGTTTATGCATCATCAAGGAAGAATTACTACAGAAAGCTATAATAAG AGCATAGAAGAACTGCTTTTAGAATGCGAAAAAAAAGAACACCTAAAGAAATTTAAAGAAGAATGGAAAATAACTTCTGG TGGAAATTTTTATATTGAATTTAAATGA
Upstream 100 bases:
>100_bases GCGCGTACAGAATTGGAAAAGTTATTTGAGTGTAAAGTTCATCTCTTTTTGTTCGTAAAAGTGCGACCTTGGACTGATCG CCCTGAGGAATATATAAGTA
Downstream 100 bases:
>100_bases ATAGATGCTACAGAGCAATCTAATGATTGCTCTGTATAGTAGTTATAAACTCCTTGTAGTAGAAAAGACATTTTGATGTG CCCTTTGCTTAACTTCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; 3-5' Exonuclease PolB; Large-Conductance Mechanosensitive Channel
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLNSLLVFDIETIPDVNSCKNLLNISDDSSVEEKRNALTKYHLEITNGQNSFLRQPFHLVVVISFLLCNITRQSGYEMFT LQEIRSGGTVNSNEKELVKGFFNYISEKKPRLVSFNGRTFDIPVLKYRAMVHGIQAEYFHKAGDKWNSYNQRYSSDWHCD LLESLSDFGASARMKMNEVCAAFNLPGKIGVDGSQVMDLYDSGKIQEIRDYCETDVINTYLIYLRFMHHQGRITTESYNK SIEELLLECEKKEHLKKFKEEWKITSGGNFYIEFK
Sequences:
>Translated_275_residues MLNSLLVFDIETIPDVNSCKNLLNISDDSSVEEKRNALTKYHLEITNGQNSFLRQPFHLVVVISFLLCNITRQSGYEMFT LQEIRSGGTVNSNEKELVKGFFNYISEKKPRLVSFNGRTFDIPVLKYRAMVHGIQAEYFHKAGDKWNSYNQRYSSDWHCD LLESLSDFGASARMKMNEVCAAFNLPGKIGVDGSQVMDLYDSGKIQEIRDYCETDVINTYLIYLRFMHHQGRITTESYNK SIEELLLECEKKEHLKKFKEEWKITSGGNFYIEFK >Mature_275_residues MLNSLLVFDIETIPDVNSCKNLLNISDDSSVEEKRNALTKYHLEITNGQNSFLRQPFHLVVVISFLLCNITRQSGYEMFT LQEIRSGGTVNSNEKELVKGFFNYISEKKPRLVSFNGRTFDIPVLKYRAMVHGIQAEYFHKAGDKWNSYNQRYSSDWHCD LLESLSDFGASARMKMNEVCAAFNLPGKIGVDGSQVMDLYDSGKIQEIRDYCETDVINTYLIYLRFMHHQGRITTESYNK SIEELLLECEKKEHLKKFKEEWKITSGGNFYIEFK
Specific function: Unknown
COG id: COG3298
COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31918; Mature: 31918
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSLLVFDIETIPDVNSCKNLLNISDDSSVEEKRNALTKYHLEITNGQNSFLRQPFHLV CCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCHHHHHCHHHHH VVISFLLCNITRQSGYEMFTLQEIRSGGTVNSNEKELVKGFFNYISEKKPRLVSFNGRTF HHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEE DIPVLKYRAMVHGIQAEYFHKAGDKWNSYNQRYSSDWHCDLLESLSDFGASARMKMNEVC ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH AAFNLPGKIGVDGSQVMDLYDSGKIQEIRDYCETDVINTYLIYLRFMHHQGRITTESYNK HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH SIEELLLECEKKEHLKKFKEEWKITSGGNFYIEFK HHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEEEC >Mature Secondary Structure MLNSLLVFDIETIPDVNSCKNLLNISDDSSVEEKRNALTKYHLEITNGQNSFLRQPFHLV CCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCHHHHHCHHHHH VVISFLLCNITRQSGYEMFTLQEIRSGGTVNSNEKELVKGFFNYISEKKPRLVSFNGRTF HHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEE DIPVLKYRAMVHGIQAEYFHKAGDKWNSYNQRYSSDWHCDLLESLSDFGASARMKMNEVC ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH AAFNLPGKIGVDGSQVMDLYDSGKIQEIRDYCETDVINTYLIYLRFMHHQGRITTESYNK HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH SIEELLLECEKKEHLKKFKEEWKITSGGNFYIEFK HHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA