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The map label for this gene is idiA [H]

Identifier: 190571080

GI number: 190571080

Start: 741985

End: 743001

Strand: Direct

Name: idiA [H]

Synonym: WPa_0675

Alternate gene names: 190571080

Gene position: 741985-743001 (Clockwise)

Preceding gene: 190571079

Following gene: 190571081

Centisome position: 50.05

GC content: 33.73

Gene sequence:

>1017_bases
ATGAAAAAAGGTTTAATATTTATATCTTTAGTAGCGGCTTTATTGATAGTCGTTAATTTTTTATATAAAAATAGCGGAAT
TGATGATTCACAAGTAGTAAACGTTTATTCATCACGTAAAGAAGAATTAGTACATAGTTTGTTTGATGATTTTACAAAAA
CCACTGGCATTAAGGTACGTTATATCATTGACGATTATTCCCAATTGCTTTCACGCATGGAAAATGGTGGTGAAGCTGAT
TTGTTTTTAACTGCAGATGCAGTGAATTTGATTTTAGCCAAAAAAAGAGGGCTCTTATCTCAAGTGGATTCAGAGACTCT
AAAAAATGCCATACCTGCAAAATTTAGAGATAATGAAGATTATTGGTTTGGTCTCACAAAAAGAGCTAGAATATTGGTTT
ACAATAAAGAATCAGTAGATCCTAAGGAATTAAGTACCTATGAAGATTTAGCGAATGAAAAATGGAAAGGGAAAATATTA
GTACGCTCTTCCACAAGTCCATATAACCGATCATTGATCGCTTTTATGATTGCAAAAAATGGTTTTGAAAAAACAAAAGA
ATGGGTGAGTGGAATTGTAAGCAACATGGCAAGAAAACCAAGCGGTGGTGACACAGATCAAATTTATGCTGTAGCCGCTG
GTGAAGGCAATGTTGCAATAGTAAATAGCTACTACTTTGCAAGAATCCTTTCATCAGAAAATAAAAAGAATATCACAGAA
AAGTTAGGAGCTTTCTTTCCGAGTGATGGTGTAATGGTGAATATTAGTGGTGCAGCAGTAACAAAAAACGCAAAACACAG
AGAAAATGCCATAGCTTTATTGGAGTTTTTTGTAAGCAAACAGGCTCAAGAGCTATATGCTAAAAAAAATCAAGAATATC
CTATTGTTGAAGGTATTGAAACTTCTGATGTGTTAAAATCTTGGGGAAATTACCTACAAAGTACTCTGCCTATAAGTGAG
CTTGAGAAGCATCTCTTTGAGGCTGTTATGATAGCAGATGAATGTAAGTGGAAATAA

Upstream 100 bases:

>100_bases
CGCTATTCCAGTACTGTAACTGCAACGTTTTGAAGATTTACACTTGCTAAGACCTTGCTATTTTGATAGCTTGAGATGAT
GACAAGGAAGGGGTTTGTTT

Downstream 100 bases:

>100_bases
AATTTTATAGCTTCCTTCTACTTTACTTTACAGTTGTGTAATTGAAATTAAGAAAGTAGAATAAGCTCAAAAAAGGAGCT
ATGGACAAGAGAAGGAATTT

Product: iron compound ABC transporter, periplasmic iron compound-binding protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSRKEELVHSLFDDFTKTTGIKVRYIIDDYSQLLSRMENGGEAD
LFLTADAVNLILAKKRGLLSQVDSETLKNAIPAKFRDNEDYWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKIL
VRSSTSPYNRSLIAFMIAKNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILSSENKKNITE
KLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQEYPIVEGIETSDVLKSWGNYLQSTLPISE
LEKHLFEAVMIADECKWK

Sequences:

>Translated_338_residues
MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSRKEELVHSLFDDFTKTTGIKVRYIIDDYSQLLSRMENGGEAD
LFLTADAVNLILAKKRGLLSQVDSETLKNAIPAKFRDNEDYWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKIL
VRSSTSPYNRSLIAFMIAKNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILSSENKKNITE
KLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQEYPIVEGIETSDVLKSWGNYLQSTLPISE
LEKHLFEAVMIADECKWK
>Mature_338_residues
MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSRKEELVHSLFDDFTKTTGIKVRYIIDDYSQLLSRMENGGEAD
LFLTADAVNLILAKKRGLLSQVDSETLKNAIPAKFRDNEDYWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKIL
VRSSTSPYNRSLIAFMIAKNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILSSENKKNITE
KLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQEYPIVEGIETSDVLKSWGNYLQSTLPISE
LEKHLFEAVMIADECKWK

Specific function: May also be part of a periplasmic ABC transporter complex involved in iron import [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37950; Mature: 37950

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSRKEELVHSLFDDFTKTTGIKVR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
YIIDDYSQLLSRMENGGEADLFLTADAVNLILAKKRGLLSQVDSETLKNAIPAKFRDNED
EEHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKILVRSSTSPYNRSLIAFMIAKN
EEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
GFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILSSENKKNITE
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHH
KLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQEYPIVEGIE
HHHCCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSDVLKSWGNYLQSTLPISELEKHLFEAVMIADECKWK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSRKEELVHSLFDDFTKTTGIKVR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
YIIDDYSQLLSRMENGGEADLFLTADAVNLILAKKRGLLSQVDSETLKNAIPAKFRDNED
EEHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKILVRSSTSPYNRSLIAFMIAKN
EEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
GFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILSSENKKNITE
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCHHHHHH
KLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQEYPIVEGIE
HHHCCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSDVLKSWGNYLQSTLPISELEKHLFEAVMIADECKWK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]