| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is engB
Identifier: 190570517
GI number: 190570517
Start: 37421
End: 38014
Strand: Reverse
Name: engB
Synonym: WPa_0042
Alternate gene names: 190570517
Gene position: 38014-37421 (Counterclockwise)
Preceding gene: 190570520
Following gene: 190570516
Centisome position: 2.56
GC content: 31.99
Gene sequence:
>594_bases ATGGCAAAACAGATAACATCAATCTGCAGCTTCATATTTGGAGCTTCAGACAAAAAATCATTACCAGATGAGTCGGCTCC AGAGATTGCATTTGCTGGTAGATCAAACGTAGGAAAATCAAGTTTAATCAACTTGCTGATAAACAGCAAAAAAGCTGCAA GAGTTTCTTCTAAACCTGGATGCACTAGACAAATAAATTTTTACTCTATGTACAATGATAAGTTTAGGATTGTCGACCTA CCGGGTTATGGCTATTCTTGTGCAAGCAAGGAAGAAGCAGTACAATACTTAAACCTAATTGAGTACTATCTAATTCACAG GAGAAATCTAAAAAGAGTGTTTGTGCTTATAGATAGCAAGGTAGGATTAAAAGAAATAGACAAAGACTTTGTTTATTGGT TAATATGTAATAATATTAACTTTAATATTGTGCTAACAAAAATAGATAAAGTGAATCAGGAAAGTCTAAATGCTATTCTA GAAAATACTCAAAAGTGGGTTAATAATGAACATGTATCAATTCATCAAATAAGCATTCGTGTTAAGCATAAAATCACCAA GGTAAGAGATGAGTTTTTCAAATTTACAAGATAA
Upstream 100 bases:
>100_bases AGTTTTCAGCTGTTTAAGTAAGTAATATATACTGAAATAAAAAATTTCTTATATCAAGCAATAACACTATAATTGTCTCG AATATTTCTACCTAAGTATA
Downstream 100 bases:
>100_bases AAAAATGAAAAGTGATGAATCTTTAAATGGTAAGATGCCATTGAAGGAAAAAACAGAAATATTATTTGAAGTTCTGTCTA ACATACCTAAATTTGTAGGC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAKQITSICSFIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRIVDL PGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVGLKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAIL ENTQKWVNNEHVSIHQISIRVKHKITKVRDEFFKFTR
Sequences:
>Translated_197_residues MAKQITSICSFIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRIVDL PGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVGLKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAIL ENTQKWVNNEHVSIHQISIRVKHKITKVRDEFFKFTR >Mature_196_residues AKQITSICSFIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRIVDLP GYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVGLKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAILE NTQKWVNNEHVSIHQISIRVKHKITKVRDEFFKFTR
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=149, Percent_Identity=41.6107382550336, Blast_Score=110, Evalue=7e-25, Organism=Homo sapiens, GI56549687, Length=154, Percent_Identity=33.1168831168831, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI145693205, Length=184, Percent_Identity=36.4130434782609, Blast_Score=120, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6320543, Length=134, Percent_Identity=34.3283582089552, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_WOLPP (B3CL86)
Other databases:
- EMBL: AM999887 - RefSeq: YP_001974875.1 - EnsemblBacteria: EBWOLT00000000457 - GeneID: 6384558 - GenomeReviews: AM999887_GR - KEGG: wpi:WPa_0042 - GeneTree: EBGT00050000030871 - HOGENOM: HBG447097 - OMA: YLESRES - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 22720; Mature: 22588
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQITSICSFIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPG CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCC CTRQINFYSMYNDKFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSK CCEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC VGLKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAILENTQKWVNNEHVSIHQISIR CCHHHHCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEE VKHKITKVRDEFFKFTR HHHHHHHHHHHHHHCCC >Mature Secondary Structure AKQITSICSFIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPG CHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCC CTRQINFYSMYNDKFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSK CCEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC VGLKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAILENTQKWVNNEHVSIHQISIR CCHHHHCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEE VKHKITKVRDEFFKFTR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA