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The map label for this gene is secF [H]

Identifier: 190570480

GI number: 190570480

Start: 1692

End: 2567

Strand: Direct

Name: secF [H]

Synonym: WPa_0002

Alternate gene names: 190570480

Gene position: 1692-2567 (Clockwise)

Preceding gene: 190570764

Following gene: 190570482

Centisome position: 0.11

GC content: 33.9

Gene sequence:

>876_bases
ATGGCAATTAGACTTATTCCAGATAATCTTGATATAAGATTTAGTAAATATAGAAATTTGACAGCACTTGTTAGCGTTAT
TCTTATCATTTTTTCAATGCTTACTTTTATGCTGCGTGGAATGAATTTGGGTATAGACTTTACAGGTGGAATTTTGATAG
AGATAAAATCTTCAAGCAAGGATGATGCTATTCTCGGTATATTAAAAGAGAGTGGATTTACGATACAGAGTTCAAAAGCT
GGTGATAACTTAGTTGTGCGGTTTAAAGATGAGGGAGATGAAGATAAAATTAAAAAGGTTAAAAGTATATTAGAAAGCAA
ATTAGGTAATTTAGTAACTTATCGTAAAATAGATTATGTTGGTCCACAAATAGGCTCAACGCAGATATTTGAAGGGATAT
CAGCCATGTTAATTGCAATTATTGGAATATTTTTTTATGTTTGGCTTAGATTTAGCTGGCAGTGTGGACTTGGTGGAATA
ATGGCACTGATCCATGATGTGATTTTAACTCTTGGCTTTATCAGCTTAACGAGTATTGAGTTTAATATTTCATCAGTTGC
AGCTCTACTTACCGTGATTGGCTATTCAATCAATAATTCAGTGGTTATATACGATCGGATTCGAGAGTATAAAAAAAATA
GAAAAGATGTAGAAATGGATGAAATAGTTGATGCTAGCATTAATTCTACACTATTTCGTACTATGTTAACTTCAGGTACT
ACTCTTCTTGCTGCTCTTCCTTTAGTGCTGATTTGTACAGGTGTGGTCAGAGACTTCTGCTTAATCATTTCTTTTGGCAT
TGCAATCGGCACCTGTTCCGCAATATTTATCTCTGCTCCTATATTGACCTGCAGAGCGTTGATAAGTAGAGTATAG

Upstream 100 bases:

>100_bases
GTAGATTAAGTAAATCAAAGATCATTATTAGTATAAGCTAAGAGAAAATAGCTAGTCGATTGCTTAAAAAGTATATAAAA
TCACAATTTAAGTAGGAAAT

Downstream 100 bases:

>100_bases
AACGTTTAACTACGATATAATATTAGCTTATTATCCCTAATAGTGAAATGAAAATATCTCAAAAAGCTCATACCAAGTAA
TGAATGGGACATAGAGTGAG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAIRLIPDNLDIRFSKYRNLTALVSVILIIFSMLTFMLRGMNLGIDFTGGILIEIKSSSKDDAILGILKESGFTIQSSKA
GDNLVVRFKDEGDEDKIKKVKSILESKLGNLVTYRKIDYVGPQIGSTQIFEGISAMLIAIIGIFFYVWLRFSWQCGLGGI
MALIHDVILTLGFISLTSIEFNISSVAALLTVIGYSINNSVVIYDRIREYKKNRKDVEMDEIVDASINSTLFRTMLTSGT
TLLAALPLVLICTGVVRDFCLIISFGIAIGTCSAIFISAPILTCRALISRV

Sequences:

>Translated_291_residues
MAIRLIPDNLDIRFSKYRNLTALVSVILIIFSMLTFMLRGMNLGIDFTGGILIEIKSSSKDDAILGILKESGFTIQSSKA
GDNLVVRFKDEGDEDKIKKVKSILESKLGNLVTYRKIDYVGPQIGSTQIFEGISAMLIAIIGIFFYVWLRFSWQCGLGGI
MALIHDVILTLGFISLTSIEFNISSVAALLTVIGYSINNSVVIYDRIREYKKNRKDVEMDEIVDASINSTLFRTMLTSGT
TLLAALPLVLICTGVVRDFCLIISFGIAIGTCSAIFISAPILTCRALISRV
>Mature_290_residues
AIRLIPDNLDIRFSKYRNLTALVSVILIIFSMLTFMLRGMNLGIDFTGGILIEIKSSSKDDAILGILKESGFTIQSSKAG
DNLVVRFKDEGDEDKIKKVKSILESKLGNLVTYRKIDYVGPQIGSTQIFEGISAMLIAIIGIFFYVWLRFSWQCGLGGIM
ALIHDVILTLGFISLTSIEFNISSVAALLTVIGYSINNSVVIYDRIREYKKNRKDVEMDEIVDASINSTLFRTMLTSGTT
LLAALPLVLICTGVVRDFCLIISFGIAIGTCSAIFISAPILTCRALISRV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=268, Percent_Identity=35.4477611940299, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32046; Mature: 31915

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRLIPDNLDIRFSKYRNLTALVSVILIIFSMLTFMLRGMNLGIDFTGGILIEIKSSSK
CEEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCC
DDAILGILKESGFTIQSSKAGDNLVVRFKDEGDEDKIKKVKSILESKLGNLVTYRKIDYV
CCHHEEEECCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHC
GPQIGSTQIFEGISAMLIAIIGIFFYVWLRFSWQCGLGGIMALIHDVILTLGFISLTSIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEE
FNISSVAALLTVIGYSINNSVVIYDRIREYKKNRKDVEMDEIVDASINSTLFRTMLTSGT
ECHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
TLLAALPLVLICTGVVRDFCLIISFGIAIGTCSAIFISAPILTCRALISRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIRLIPDNLDIRFSKYRNLTALVSVILIIFSMLTFMLRGMNLGIDFTGGILIEIKSSSK
EEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCC
DDAILGILKESGFTIQSSKAGDNLVVRFKDEGDEDKIKKVKSILESKLGNLVTYRKIDYV
CCHHEEEECCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHC
GPQIGSTQIFEGISAMLIAIIGIFFYVWLRFSWQCGLGGIMALIHDVILTLGFISLTSIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEE
FNISSVAALLTVIGYSINNSVVIYDRIREYKKNRKDVEMDEIVDASINSTLFRTMLTSGT
ECHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
TLLAALPLVLICTGVVRDFCLIISFGIAIGTCSAIFISAPILTCRALISRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA