Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome chromosome I, complete sequence.
Accession NC_010842
Length 3,603,977

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The map label for this gene is rpoB

Identifier: 189911447

GI number:

Start: 2056005

End: 2059691

Strand: Reverse

Name: rpoB

Synonym: LBF_1920

Alternate gene names: NA

Gene position: NA

Preceding gene: 189911448

Following gene: 189911446

Centisome position: NA

GC content: NA

Gene sequence:

>3687_bases
ATGCATACCCGAATGCAAATTAGAAACCGGGTAAATTTCGGTAAAATTACCGACCTCAATTTACTTCCTAATCTTATCTA
CGTACAGAAAAAATCCTTTGATTGGTTCCTCCAGTCGGAAGTGAAAGATCCGACGAAACGTTTGAACCAAGGGTTGGAAG
CGGTATTCCGCGAATCATTCCCAATCGAATCACCAAACAACGATATGGTCATGGAATATGGCCATTACGTTTTGGGAGAG
CCGAAACGCGATCCCCAAGAGTGCAAAGACACTGATTCTTCTTTTGCTGTTCCACTGAAAGCAGTCATCCGTCTCATCAT
CAAAGACACCGGTGAAATCCGCGAACAAGTCGTCTACATGGGTGACCTTCCTGTGATGACAGACCACGGAACTTTCATCA
TCAATGGTGCCGAAAGGGTAGTGGTAAGCCAGTTACACCGATCTCCTGGTATTTTCTTTTCGTATGACCAAGTACGAGAT
ACATTTTCTGCCCGAGTGATTCCTTATCGTGGATCATGGTTAGAATTCGAGATGGACAACAAGGGAATCCTCGTTGCCAA
AATCGACCGTAAGAAAAATTTCCCAGCGACTCTCCTTGTGAAAGCCATGGGTATGGGAACAAACGAAGAAGTACTTCGCC
TTTTCTACGGATCTAGCAAAATGAAAATCGCTGGTGCCAATCCAAAAGACCTCAAACGTCTGATTGGCCGCCGAACCATT
GCGGATATTATCAATATGGAAACCGGTGAGGTAATGCTCGATGCTGGTTCCAAAATTAACGAAGACAATATCTCCATCCT
TCGTGAAATGAAGGTAAAAGAAGTGGATGTCATCGAATTTCCAAAAGGAAAAGACAATCCAGTTCTCATCAATTGCCTAG
AAAAAGACGGAGTGAACGACTACGAGGATGCAGTGAAAAAATTTCACACGATCATGCGTCCAGGGGAACCTTCTACGATT
GAAAACGCGGAAGCTGAGTTAAAACGCCTCTTTTTCTCTCCAAAAACGTTTGATTTAGGAATTGTTGGTCGTTACAAAAT
CAATAGCAAATTCGAGTTCAACAATCCAAAAGAATTCTCAAAAGCAGATGATCGGGTTCTCCGAAAACAAGACATCATCG
AAACCGTTCGTTACCTTGTGATGCTTATGTCAGAAGCGGAAAATTATTACCCAGATGACATTGACCACTTAGGAAACAGA
AGGATCCGTTCGGTGGGGGAACTCATCGCTAACCAATTGAAACTTGGTTTTTCCAGAGTGGAACGAGTCATCAAAGAAAG
GATGACAGTACAGGAGCCGGAACAACAAACTCCTCAGCTTCTTATCTCCATCAAACCAATCACAGCAGTGATCAATGAGT
TTTTTGGATCTTCGCAACTCTCTCAGTTTATGGACCAAACCAATCCCTTGGCAGAACTTACGCACAAACGTAGGTTAAAC
GCTCTTGGGCCTGGTGGACTTTCTCGTGATAGAGCAGGTTTTGAGGTTCGTGACGTTCATTATTCTCACTACGGTCGTAT
GTGCCCCATTGAAACACCGGAAGGTCCAAACATTGGTCTCATTCTTTCCATGTCTAGTTTTGCACGTGTGAACGATTATG
GATTCATTGAAACTCCATACCGCCTTGTAAAGAATGGAAAAGTCCAAAAACAAGTGGAATACCTCACTGCGGACAAAGAA
GAATACCATTATATGGCGCAGTCAAATTCGACTGTGGATGAGAAGGGAGAATTCACTTCCAAACTCATTTCCACTCGTCA
TAGAGGGGATTTCCCTTTCCGTAGCCCAGCTGAAATCCAATACATGGATCTTGCTCCCTTGCAAGTGGTCTCAGTTTCCA
CAGCTCTCATTCCGTTCTTAGAACATGATGACGCGAACCGTGCCCTCATGGGTTCCAACATGCAACGCCAAGCGGTACCA
CTCTTAACAGAAGAGGCTCCTTTTGTCGGAACTGGTATGGAAGCTCGTGCGGCTTATGACGCAGGGGTTTGTATCGTTGC
GAAAAAAGATGGTGTGGTTTCCAAAGTGGATGCAACAGGTGTTTGGATCAAAGAAGACCAATCCAAAGAGATTGTCCATT
ACCCACTCATTAAATTCAAAAAAACCAACCAAGGTACTTGTTTTAACCAAAAACCAAACGTATCCATGTTACACACCACA
ACTGGTGGCAAGGTAAGTAAGGTTTCGAAAGAACGTGTCGAAGTGACAACTCCTAACGGAGAAAAAGAAACTCATGAACT
TCTTCTTTCTGATGAAGTTCAGTTCCATGCTGTTGTCAAAGAAGGACAAGAGGTAGGAATTGGAGCTCCAGTTGCCGGAC
AAATCATCAAAGGGGAAAAATACGGTGACTTCGGTCAGATCCTTCAAAAAGGAACTGTCCTAGCCAACGGGCCATCCACT
GACGCTGGGTATTTGGCACTTGGACGAAATGTTCTCGTTGCCTTTATGCCTTGGGAAGGATACAACTTTGAGGATGCGAT
TTTAATTTCTGAACGAATCATCAAAGACGATGTTTTCTCTTCCATCCACATTGAAGAATTCGAAATCCAAGCTCGGGAAA
CGAAACTCGGACAAGAACAAATCACTCGTGACATTCCAAACCTTTCGGACAAAGCGTTCCGTGATTTGGATGAGTCTGGT
GTGATCCGTGTGGGTGCAGAGGTAAAACCTGGAGACATCCTAGTTGGGATGGTGACTCCAAAAGGGGAAACAGACCTCAC
ACCTGAATACAAACTATTACACTCCATTTTTGGAGAGAAGGCAAAAGAAGTTAGGGATTCCTCACTCCGTATGCCAAACG
GTTTCGAAGGAACTGTCATCGATATCAAACGTTATTCCCGTGAAACAGGCGATGAACTCGCTGCTGGCGTGGAAGAAATG
GTAAAAGTTTACGTGGCTCGCAAACGGAAACTCCTCGTGGGTGATAAGATGGCCGGAAGACACGGGAACAAAGGGGTCGT
AGCACGTGTGATGGCACAAGAAGATATGCCATACATGGAAGACGGATCTCCAGTTGACATCGTACTCAACCCACTCGGTG
TTCCTTCGCGTATGAACCTCGGTCAGATCTTTGAAACTCAACTTGGATTTGCTGCAAAAAAACTAGGGATCAATTTTGAA
ACCCCTGTGTTTGACGGAGCTTCCGAAGGTGATGTAAACGATTTCTGCAAAAAAGCAGGATTACCGGAAAACAGCAAATT
TCAGTTATATGATGGAAGGACTGGTGAAAAATTCATCAACCAAGTATTCTGTGGATACATTTACATGTTGAAACTGGCTC
ACTTGGTGGATGACAAAATTCACGCAAGATCCACTGGACCTTACTCACTCGTAACACAACAACCACTGGGTGGTAAGGCG
CAGTTCGGGGGACAAAGGTTAGGGGAGATGGAAGTTTGGGCACTCGAAGCATACGGTGCCTCACACACCTTACAAGAATT
ACTGACCATCAAGTCAGATGACATGCTCGGACGTGCCAGAATTTACGAAGCAATTGTGAAAGGGATCCACTCGATCAAAC
CGGGTATCCCTGAATCCTTCAACGTTCTTGTACAAGAACTCCGAGGTCTCGCACTTGATATCATCATCAAAGACTCCGAA
GGATTGGAAGTGGATATCTCTGATTACGAAGATGAGTTCTCGAAAAACAAAAAGAAAATTAAATTCGAGACCATTGAAAA
CGTTTAG

Upstream 100 bases:

>100_bases
CTTCAAAAACTTAGAGGCAGGGAGGCCGTAGGCGTCCCCACCTCTATTTTTTCGTTTATCATACCATCTATTATTTTGAC
GTCTCTAGGGAGAGTATTCC

Downstream 100 bases:

>100_bases
GGAAGGGAAAAAGTATGAGAAATTACAATAGTTTTGAATCGATTACGATCCGTTTGGCATCACCCGAGCGGATCAAAGAG
TGGTCTTTCGGGGAAGTCAA

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1228_residues
MHTRMQIRNRVNFGKITDLNLLPNLIYVQKKSFDWFLQSEVKDPTKRLNQGLEAVFRESFPIESPNNDMVMEYGHYVLGE
PKRDPQECKDTDSSFAVPLKAVIRLIIKDTGEIREQVVYMGDLPVMTDHGTFIINGAERVVVSQLHRSPGIFFSYDQVRD
TFSARVIPYRGSWLEFEMDNKGILVAKIDRKKNFPATLLVKAMGMGTNEEVLRLFYGSSKMKIAGANPKDLKRLIGRRTI
ADIINMETGEVMLDAGSKINEDNISILREMKVKEVDVIEFPKGKDNPVLINCLEKDGVNDYEDAVKKFHTIMRPGEPSTI
ENAEAELKRLFFSPKTFDLGIVGRYKINSKFEFNNPKEFSKADDRVLRKQDIIETVRYLVMLMSEAENYYPDDIDHLGNR
RIRSVGELIANQLKLGFSRVERVIKERMTVQEPEQQTPQLLISIKPITAVINEFFGSSQLSQFMDQTNPLAELTHKRRLN
ALGPGGLSRDRAGFEVRDVHYSHYGRMCPIETPEGPNIGLILSMSSFARVNDYGFIETPYRLVKNGKVQKQVEYLTADKE
EYHYMAQSNSTVDEKGEFTSKLISTRHRGDFPFRSPAEIQYMDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVP
LLTEEAPFVGTGMEARAAYDAGVCIVAKKDGVVSKVDATGVWIKEDQSKEIVHYPLIKFKKTNQGTCFNQKPNVSMLHTT
TGGKVSKVSKERVEVTTPNGEKETHELLLSDEVQFHAVVKEGQEVGIGAPVAGQIIKGEKYGDFGQILQKGTVLANGPST
DAGYLALGRNVLVAFMPWEGYNFEDAILISERIIKDDVFSSIHIEEFEIQARETKLGQEQITRDIPNLSDKAFRDLDESG
VIRVGAEVKPGDILVGMVTPKGETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGFEGTVIDIKRYSRETGDELAAGVEEM
VKVYVARKRKLLVGDKMAGRHGNKGVVARVMAQEDMPYMEDGSPVDIVLNPLGVPSRMNLGQIFETQLGFAAKKLGINFE
TPVFDGASEGDVNDFCKKAGLPENSKFQLYDGRTGEKFINQVFCGYIYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKA
QFGGQRLGEMEVWALEAYGASHTLQELLTIKSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIIKDSE
GLEVDISDYEDEFSKNKKKIKFETIENV

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA