| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010842 |
| Length | 3,603,977 |
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The map label for this gene is rpoB
Identifier: 189911447
GI number:
Start: 2056005
End: 2059691
Strand: Reverse
Name: rpoB
Synonym: LBF_1920
Alternate gene names: NA
Gene position: NA
Preceding gene: 189911448
Following gene: 189911446
Centisome position: NA
GC content: NA
Gene sequence:
>3687_bases ATGCATACCCGAATGCAAATTAGAAACCGGGTAAATTTCGGTAAAATTACCGACCTCAATTTACTTCCTAATCTTATCTA CGTACAGAAAAAATCCTTTGATTGGTTCCTCCAGTCGGAAGTGAAAGATCCGACGAAACGTTTGAACCAAGGGTTGGAAG CGGTATTCCGCGAATCATTCCCAATCGAATCACCAAACAACGATATGGTCATGGAATATGGCCATTACGTTTTGGGAGAG CCGAAACGCGATCCCCAAGAGTGCAAAGACACTGATTCTTCTTTTGCTGTTCCACTGAAAGCAGTCATCCGTCTCATCAT CAAAGACACCGGTGAAATCCGCGAACAAGTCGTCTACATGGGTGACCTTCCTGTGATGACAGACCACGGAACTTTCATCA TCAATGGTGCCGAAAGGGTAGTGGTAAGCCAGTTACACCGATCTCCTGGTATTTTCTTTTCGTATGACCAAGTACGAGAT ACATTTTCTGCCCGAGTGATTCCTTATCGTGGATCATGGTTAGAATTCGAGATGGACAACAAGGGAATCCTCGTTGCCAA AATCGACCGTAAGAAAAATTTCCCAGCGACTCTCCTTGTGAAAGCCATGGGTATGGGAACAAACGAAGAAGTACTTCGCC TTTTCTACGGATCTAGCAAAATGAAAATCGCTGGTGCCAATCCAAAAGACCTCAAACGTCTGATTGGCCGCCGAACCATT GCGGATATTATCAATATGGAAACCGGTGAGGTAATGCTCGATGCTGGTTCCAAAATTAACGAAGACAATATCTCCATCCT TCGTGAAATGAAGGTAAAAGAAGTGGATGTCATCGAATTTCCAAAAGGAAAAGACAATCCAGTTCTCATCAATTGCCTAG AAAAAGACGGAGTGAACGACTACGAGGATGCAGTGAAAAAATTTCACACGATCATGCGTCCAGGGGAACCTTCTACGATT GAAAACGCGGAAGCTGAGTTAAAACGCCTCTTTTTCTCTCCAAAAACGTTTGATTTAGGAATTGTTGGTCGTTACAAAAT CAATAGCAAATTCGAGTTCAACAATCCAAAAGAATTCTCAAAAGCAGATGATCGGGTTCTCCGAAAACAAGACATCATCG AAACCGTTCGTTACCTTGTGATGCTTATGTCAGAAGCGGAAAATTATTACCCAGATGACATTGACCACTTAGGAAACAGA AGGATCCGTTCGGTGGGGGAACTCATCGCTAACCAATTGAAACTTGGTTTTTCCAGAGTGGAACGAGTCATCAAAGAAAG GATGACAGTACAGGAGCCGGAACAACAAACTCCTCAGCTTCTTATCTCCATCAAACCAATCACAGCAGTGATCAATGAGT TTTTTGGATCTTCGCAACTCTCTCAGTTTATGGACCAAACCAATCCCTTGGCAGAACTTACGCACAAACGTAGGTTAAAC GCTCTTGGGCCTGGTGGACTTTCTCGTGATAGAGCAGGTTTTGAGGTTCGTGACGTTCATTATTCTCACTACGGTCGTAT GTGCCCCATTGAAACACCGGAAGGTCCAAACATTGGTCTCATTCTTTCCATGTCTAGTTTTGCACGTGTGAACGATTATG GATTCATTGAAACTCCATACCGCCTTGTAAAGAATGGAAAAGTCCAAAAACAAGTGGAATACCTCACTGCGGACAAAGAA GAATACCATTATATGGCGCAGTCAAATTCGACTGTGGATGAGAAGGGAGAATTCACTTCCAAACTCATTTCCACTCGTCA TAGAGGGGATTTCCCTTTCCGTAGCCCAGCTGAAATCCAATACATGGATCTTGCTCCCTTGCAAGTGGTCTCAGTTTCCA CAGCTCTCATTCCGTTCTTAGAACATGATGACGCGAACCGTGCCCTCATGGGTTCCAACATGCAACGCCAAGCGGTACCA CTCTTAACAGAAGAGGCTCCTTTTGTCGGAACTGGTATGGAAGCTCGTGCGGCTTATGACGCAGGGGTTTGTATCGTTGC GAAAAAAGATGGTGTGGTTTCCAAAGTGGATGCAACAGGTGTTTGGATCAAAGAAGACCAATCCAAAGAGATTGTCCATT ACCCACTCATTAAATTCAAAAAAACCAACCAAGGTACTTGTTTTAACCAAAAACCAAACGTATCCATGTTACACACCACA ACTGGTGGCAAGGTAAGTAAGGTTTCGAAAGAACGTGTCGAAGTGACAACTCCTAACGGAGAAAAAGAAACTCATGAACT TCTTCTTTCTGATGAAGTTCAGTTCCATGCTGTTGTCAAAGAAGGACAAGAGGTAGGAATTGGAGCTCCAGTTGCCGGAC AAATCATCAAAGGGGAAAAATACGGTGACTTCGGTCAGATCCTTCAAAAAGGAACTGTCCTAGCCAACGGGCCATCCACT GACGCTGGGTATTTGGCACTTGGACGAAATGTTCTCGTTGCCTTTATGCCTTGGGAAGGATACAACTTTGAGGATGCGAT TTTAATTTCTGAACGAATCATCAAAGACGATGTTTTCTCTTCCATCCACATTGAAGAATTCGAAATCCAAGCTCGGGAAA CGAAACTCGGACAAGAACAAATCACTCGTGACATTCCAAACCTTTCGGACAAAGCGTTCCGTGATTTGGATGAGTCTGGT GTGATCCGTGTGGGTGCAGAGGTAAAACCTGGAGACATCCTAGTTGGGATGGTGACTCCAAAAGGGGAAACAGACCTCAC ACCTGAATACAAACTATTACACTCCATTTTTGGAGAGAAGGCAAAAGAAGTTAGGGATTCCTCACTCCGTATGCCAAACG GTTTCGAAGGAACTGTCATCGATATCAAACGTTATTCCCGTGAAACAGGCGATGAACTCGCTGCTGGCGTGGAAGAAATG GTAAAAGTTTACGTGGCTCGCAAACGGAAACTCCTCGTGGGTGATAAGATGGCCGGAAGACACGGGAACAAAGGGGTCGT AGCACGTGTGATGGCACAAGAAGATATGCCATACATGGAAGACGGATCTCCAGTTGACATCGTACTCAACCCACTCGGTG TTCCTTCGCGTATGAACCTCGGTCAGATCTTTGAAACTCAACTTGGATTTGCTGCAAAAAAACTAGGGATCAATTTTGAA ACCCCTGTGTTTGACGGAGCTTCCGAAGGTGATGTAAACGATTTCTGCAAAAAAGCAGGATTACCGGAAAACAGCAAATT TCAGTTATATGATGGAAGGACTGGTGAAAAATTCATCAACCAAGTATTCTGTGGATACATTTACATGTTGAAACTGGCTC ACTTGGTGGATGACAAAATTCACGCAAGATCCACTGGACCTTACTCACTCGTAACACAACAACCACTGGGTGGTAAGGCG CAGTTCGGGGGACAAAGGTTAGGGGAGATGGAAGTTTGGGCACTCGAAGCATACGGTGCCTCACACACCTTACAAGAATT ACTGACCATCAAGTCAGATGACATGCTCGGACGTGCCAGAATTTACGAAGCAATTGTGAAAGGGATCCACTCGATCAAAC CGGGTATCCCTGAATCCTTCAACGTTCTTGTACAAGAACTCCGAGGTCTCGCACTTGATATCATCATCAAAGACTCCGAA GGATTGGAAGTGGATATCTCTGATTACGAAGATGAGTTCTCGAAAAACAAAAAGAAAATTAAATTCGAGACCATTGAAAA CGTTTAG
Upstream 100 bases:
>100_bases CTTCAAAAACTTAGAGGCAGGGAGGCCGTAGGCGTCCCCACCTCTATTTTTTCGTTTATCATACCATCTATTATTTTGAC GTCTCTAGGGAGAGTATTCC
Downstream 100 bases:
>100_bases GGAAGGGAAAAAGTATGAGAAATTACAATAGTTTTGAATCGATTACGATCCGTTTGGCATCACCCGAGCGGATCAAAGAG TGGTCTTTCGGGGAAGTCAA
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1228_residues MHTRMQIRNRVNFGKITDLNLLPNLIYVQKKSFDWFLQSEVKDPTKRLNQGLEAVFRESFPIESPNNDMVMEYGHYVLGE PKRDPQECKDTDSSFAVPLKAVIRLIIKDTGEIREQVVYMGDLPVMTDHGTFIINGAERVVVSQLHRSPGIFFSYDQVRD TFSARVIPYRGSWLEFEMDNKGILVAKIDRKKNFPATLLVKAMGMGTNEEVLRLFYGSSKMKIAGANPKDLKRLIGRRTI ADIINMETGEVMLDAGSKINEDNISILREMKVKEVDVIEFPKGKDNPVLINCLEKDGVNDYEDAVKKFHTIMRPGEPSTI ENAEAELKRLFFSPKTFDLGIVGRYKINSKFEFNNPKEFSKADDRVLRKQDIIETVRYLVMLMSEAENYYPDDIDHLGNR RIRSVGELIANQLKLGFSRVERVIKERMTVQEPEQQTPQLLISIKPITAVINEFFGSSQLSQFMDQTNPLAELTHKRRLN ALGPGGLSRDRAGFEVRDVHYSHYGRMCPIETPEGPNIGLILSMSSFARVNDYGFIETPYRLVKNGKVQKQVEYLTADKE EYHYMAQSNSTVDEKGEFTSKLISTRHRGDFPFRSPAEIQYMDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVP LLTEEAPFVGTGMEARAAYDAGVCIVAKKDGVVSKVDATGVWIKEDQSKEIVHYPLIKFKKTNQGTCFNQKPNVSMLHTT TGGKVSKVSKERVEVTTPNGEKETHELLLSDEVQFHAVVKEGQEVGIGAPVAGQIIKGEKYGDFGQILQKGTVLANGPST DAGYLALGRNVLVAFMPWEGYNFEDAILISERIIKDDVFSSIHIEEFEIQARETKLGQEQITRDIPNLSDKAFRDLDESG VIRVGAEVKPGDILVGMVTPKGETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGFEGTVIDIKRYSRETGDELAAGVEEM VKVYVARKRKLLVGDKMAGRHGNKGVVARVMAQEDMPYMEDGSPVDIVLNPLGVPSRMNLGQIFETQLGFAAKKLGINFE TPVFDGASEGDVNDFCKKAGLPENSKFQLYDGRTGEKFINQVFCGYIYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKA QFGGQRLGEMEVWALEAYGASHTLQELLTIKSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIIKDSE GLEVDISDYEDEFSKNKKKIKFETIENV
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA