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The map label for this gene is vacB

Identifier: 189909592

GI number:

Start: 23907

End: 26099

Strand: Reverse

Name: vacB

Synonym: LBF_0022

Alternate gene names: NA

Gene position: NA

Preceding gene: 189909593

Following gene: 189909590

Centisome position: NA

GC content: NA

Gene sequence:

>2193_bases
ATGGATACCTATAAAATACAAAGAAAAATCATCGAATATCTAGACCAAAAGTCAGGTAAAGATATCACAAGACAAGAGAT
CAAAAAAAAATTCATTGAATCCAGTGAATTCAAACGACCCGACCCAAAAACTAAAAAAGTAAAAGCCTTCAAACGAAAAG
AGAAAGTTCCAAGAAAGGAAATCGAATTTCTCATCGATCAACTTTGTAACCTACTGGAAGTCGAAGGATTACTCATTCCC
AATAAAAAATACCTAACTGTTGCTAAACCATTTCGACTCACTGGTAGGATCTCCATTTCAAGAAGAGGTGATGGTTTCAT
TTCCTTACCATCCAAAAACGAAATATTTGTACCAGGCCCACTCACAAACACCGCCATCTCTGGTGATAAAGTGGAAGTGA
TCCCACTCGGTGTTGGTAAAAAAGACCGGCTGGAGGCAGAAGTCACAAAGATTCTCAAACGAGGTCGTATTTTATATCGA
ATGCGAGTCAAAGAAAAAACCAATAAATTTGTTTTTGGGAATTTTTTAGATATGTTAGGTGACGGTAAAGAAGGTGTACT
ACATGTTAAATCGATACTCAAGGATAGTTTCGATGCAATCAACATTGATGATGTACTGATTGTTAAACTGAAAGAAGGTG
CCGAACCACAAGACAATCTTTATGATGTGAGTTTCATACGATTTGAATCAGACACAAAAGAAGATGGCGATTTACAACGG
ATCTTAATGAAATACAATTATGATCCGGTGCATCCCGATTTTATTCCATTGGATTTTCCAGAAGAAGTTACGGAAAAAAC
AGTTTCGGATTGGAATCGCAGAACGGATCTACGTGATCTGTATGCGGTCACAATCGATGGAATCACAGCCAAAGATTTTG
ATGATGCTATCAGTTTTGTTGATGAAGGAAATCGGCTTAGGATTTGGATCCACATTGCAGATGTATCCTATTATGTAGAA
AAGGGATCTGCCTTAGATAAAGAAGCGTATGAAAGGGCTACATCAGTTTATCTAGCCAATCGTGTCGTTCCAATGCTTCC
ACCCATACTATCGGAAGACCTATGTAGTCTTGTCGCCAATACAAATCGATTGGCTTTCACAGTGGAGATGGAAGCGAGTA
AATCAGGTGAAATTTACAATGCCAAGTTTTACAAATCCATCATCAAAGTCAAAAAACGTTACACGTATGAGATGGCCGAA
GAGGAAATAAAGGCACAGGATCCAAATAATTGGATGTACCAAGTTTCGCTCTTCACAGATGCTCTTCGTAAACATAGGAT
GAAAACTGGTCGTATTGACTTAAATTTACGAGAAACAACGATCACTTGGAACGAAAGAAAAGAACCAATTGGAATTGAAA
ATCGTGAACGTCTAACAAGTCATATTTTGATCGAAGAATTGATGTTGTCTGCCAATTTGAAAGTGGATGAATTCCTTCGC
AAAAAAAAGATTCCAACTCTCCACCGAATCCATGAACCTATGGATGAAGAAAAATTAGAAACTCTCAATCACTTCTTACA
ACTCAATGGGTACAATGTTCAAATCCATGATACAAGTTATCCTGAAATCATGAAGGCCGTGAAAGAAATCCAAGACAACT
CTGTTGGAAAAATATTCAATTATTTATTACTACGAAGTTTTATGCAGGCTTATTATGGAGCCGATCCACTCGGACATTGG
GGACTTGGTTTTAAAGACTATTGCCACTTTACATCTCCTATCAGGCGTTATCCTGATTTGATTGTCCACAGAGTTCTTCA
GGCAACTTTGTTAGAAACTGATAAGGAATATTCAGAAAATGAAATTGCAGTGATGGGCCTCCATTGTTCAGAAGAAGAAA
GAAGAGCGGCAGACGCAGAAAGAGACATTGTCAAAATCAAATCATTTCGTTATCTCGAATCAACCGGAATCAAAGAATTT
AAAGGTTTTATCGTAGGGATCCGTCCTTCTCAAATTTTTGTGGAATTAGACATTTCCAATTTGGAAGGAGTTCTTGATAA
ATCAGAGTTTACTGATGAGTTTGAAGTGATGATTAAAAATGATTTTTCTTTTTATTCCAAAAAGTATTCCAAGATTTTTT
TCATCGGAGATCCAGTGACAGTGAGTTTAGATCGAATCGATTTCGAAGAAATCAAAGTCTTTTTAAAACTAAAAGATTTC
AAAAAAGACGATACACCAACCAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
AGTTTGGAACAAATCAAACAAACAAATCTTAAGAATTACGACTATTTATCTCTCCTACCCAATTACATTCGTGGGACCTA
CGTAGATCAAAAATGAATTT

Downstream 100 bases:

>100_bases
GCATTTCCGTCGAATGTATCTTAAAAGGATACATTCGGTATTTCTTCTCGTTTCCAAATTTTTCTAAAAAACTTTCTTTG
TTTAACCTCAATGGATAAAA

Product: exoribonuclease R

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>730_residues
MDTYKIQRKIIEYLDQKSGKDITRQEIKKKFIESSEFKRPDPKTKKVKAFKRKEKVPRKEIEFLIDQLCNLLEVEGLLIP
NKKYLTVAKPFRLTGRISISRRGDGFISLPSKNEIFVPGPLTNTAISGDKVEVIPLGVGKKDRLEAEVTKILKRGRILYR
MRVKEKTNKFVFGNFLDMLGDGKEGVLHVKSILKDSFDAINIDDVLIVKLKEGAEPQDNLYDVSFIRFESDTKEDGDLQR
ILMKYNYDPVHPDFIPLDFPEEVTEKTVSDWNRRTDLRDLYAVTIDGITAKDFDDAISFVDEGNRLRIWIHIADVSYYVE
KGSALDKEAYERATSVYLANRVVPMLPPILSEDLCSLVANTNRLAFTVEMEASKSGEIYNAKFYKSIIKVKKRYTYEMAE
EEIKAQDPNNWMYQVSLFTDALRKHRMKTGRIDLNLRETTITWNERKEPIGIENRERLTSHILIEELMLSANLKVDEFLR
KKKIPTLHRIHEPMDEEKLETLNHFLQLNGYNVQIHDTSYPEIMKAVKEIQDNSVGKIFNYLLLRSFMQAYYGADPLGHW
GLGFKDYCHFTSPIRRYPDLIVHRVLQATLLETDKEYSENEIAVMGLHCSEEERRAADAERDIVKIKSFRYLESTGIKEF
KGFIVGIRPSQIFVELDISNLEGVLDKSEFTDEFEVMIKNDFSFYSKKYSKIFFIGDPVTVSLDRIDFEEIKVFLKLKDF
KKDDTPTKKK

Sequences:
NA

Specific function: NA

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA