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The map label for this gene is rps15p [H]

Identifier: 18978428

GI number: 18978428

Start: 1896268

End: 1896744

Strand: Reverse

Name: rps15p [H]

Synonym: PF2056

Alternate gene names: 18978428

Gene position: 1896744-1896268 (Counterclockwise)

Preceding gene: 18978429

Following gene: 18978427

Centisome position: 99.4

GC content: 45.28

Gene sequence:

>477_bases
ATGGCGAGGATGCATGCTAGAAAGAGGGGTAAGAGTGGGTCAAAGAGGCCTCCAAGGACGGCTCCTCCAATTTGGGTGGA
GTATACTGTTGAAGAAATAGAGAACCTTGTGGTTAAGCTTAGGAAGGAAGGGTATAGCACAGCAATGATTGGAACAATCC
TAAGAGACCAGTATGGAATCCCTAGCGTTAAGCTGTTTAAAGATCCTGACAATCCAAATAGAAACTTAACAATAACGAGA
ATACTCGAAAAGCACGGTCTTGCTCCAGAGATACCTGAAGACTTAATGTTCCTCATTAGAAGGGCAGTAAACCTTAGAAA
GCACCTTGAGCAGCATCCAAAGGACCTGCACTCAATGCGTGGTCTTCAGCTCATAGAGAGCAAGATAAGGAGACTTGTTA
AGTACTACAAGAGGAAGGGTAAGCTTCCAAAGAACTGGCGTTACGACCCAGAGACTGCAAAGTTGCTCGTCCGCTGA

Upstream 100 bases:

>100_bases
TTAAAGGGAAATTCCAAAAACCTTTTAAATGCTATAATCAATCATGCGCCGAAAGGGACCGGCTGGCCTTAGGCTGGCCG
TCACCATGGAGGTGATGTAA

Downstream 100 bases:

>100_bases
TCCTTCCCTATATTTTCATTTGGTGTTTTTCATGGATAAGGAGGGTTTTTTGAACAAGGTTAGGGAGGCTGTGGATGTAG
TAAAGCTCCACATCGAGTTA

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITR
ILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLVR

Sequences:

>Translated_158_residues
MARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITR
ILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLVR
>Mature_157_residues
ARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITRI
LEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLVR

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family [H]

Homologues:

Organism=Homo sapiens, GI4506685, Length=157, Percent_Identity=44.5859872611465, Blast_Score=126, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17554774, Length=157, Percent_Identity=42.6751592356688, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320269, Length=157, Percent_Identity=40.7643312101911, Blast_Score=122, Evalue=3e-29,
Organism=Drosophila melanogaster, GI85724904, Length=157, Percent_Identity=42.6751592356688, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17136832, Length=157, Percent_Identity=42.6751592356688, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068 [H]

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15 [H]

EC number: NA

Molecular weight: Translated: 18600; Mature: 18469

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGI
CCCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMR
CCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLVR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
ARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGI
CCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMR
CCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLVR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]