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The map label for this gene is rps3Ae

Identifier: 18978426

GI number: 18978426

Start: 1893978

End: 1894574

Strand: Reverse

Name: rps3Ae

Synonym: PF2054

Alternate gene names: 18978426

Gene position: 1894574-1893978 (Counterclockwise)

Preceding gene: 33359593

Following gene: 18978422

Centisome position: 99.28

GC content: 41.21

Gene sequence:

>597_bases
ATGGCTGCGAAAAGGGCTACAACAACAAGGGATAAGTGGAAGTTGAAGCAATGGTATATTATTTATGCTCCCGACTTCTT
TGGCGGGGTAGAGGTAGGATTAACGCCAGCAGACGATCCAGAGAAAGTACTCAACAGAGTCGTTGAAGTTACTCTGAAGG
ATGTTACAGGAGACTTTACAAAGAGTCACGTGAAGCTCTATTTCCAAGTATATGATGTCAAGGGACAGAATGCCTACACA
AAGTTCAAGGGAATGAAGCTTGCAAGGAGTTACATAAGATCCCTTGTCAGGAGAAAGACTACAAGAATTGATGGAATATT
CAACATAACAACGAAAGATGGGTACAAGTTGAGGGTAATGGCAATGGCCATAGCAATGAGAAGAATACAAACGAGCCAAG
AGAGGGCTATTAGAAAGATAATGCAGGAAATTATCTACAAGAAAGCTGAAGAACTAAACTTCAAGGACTTTGTTTTAGAA
TCCGTAAACGGCAAAATTGCAGCTGAGATTGCAAAGGAGGCAAAGAAGATCTACCCGCTAAGAAAGGCAGAGATAAGAAA
GATAAAAGTGTTGGAAGAGCCCCAGGTTATAGCTTAG

Upstream 100 bases:

>100_bases
AGGTAATAACAAAGGTTAAATATCATGGAGAAATTGAGACTCTCATAGTTGCTCTCGATGATTTGATATTCGCTGTAAAA
GTTGCTGAGGAGGTGTTATG

Downstream 100 bases:

>100_bases
AGAAGCTCAAACTTTGGAATGTCACTAACAAACTCGACTTCGAGATCTTCAATACCATTAATTTCTTTAATTACATCGTT
GACCTTTTCTTGTGCTTTTT

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAAKRATTTRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYT
KFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLE
SVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQVIA

Sequences:

>Translated_198_residues
MAAKRATTTRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYT
KFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLE
SVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQVIA
>Mature_197_residues
AAKRATTTRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYTK
FKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLES
VNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQVIA

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=203, Percent_Identity=31.5270935960591, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17553700, Length=205, Percent_Identity=31.7073170731707, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6323577, Length=201, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323474, Length=203, Percent_Identity=32.512315270936, Blast_Score=99, Evalue=3e-22,
Organism=Drosophila melanogaster, GI17864162, Length=203, Percent_Identity=31.5270935960591, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24638499, Length=162, Percent_Identity=33.9506172839506, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_PYRFU (Q8TZE1)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579783.1
- ProteinModelPortal:   Q8TZE1
- EnsemblBacteria:   EBPYRT00000005770
- GeneID:   1469941
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF2054
- NMPDR:   fig|186497.1.peg.2111
- GeneTree:   EBGT00050000022970
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- InterPro:   IPR018281
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 22942; Mature: 22811

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKRATTTRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGDFT
CCCCCCCCCHHHEEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
KSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVM
HHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH
AMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
RKAEIRKIKVLEEPQVIA
CHHHHHHEEEECCCCCCC
>Mature Secondary Structure 
AAKRATTTRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGDFT
CCCCCCCCHHHEEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
KSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVM
HHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH
AMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
RKAEIRKIKVLEEPQVIA
CHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA