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The map label for this gene is yqkD [H]

Identifier: 18978373

GI number: 18978373

Start: 1849763

End: 1850629

Strand: Reverse

Name: yqkD [H]

Synonym: PF2001

Alternate gene names: 18978373

Gene position: 1850629-1849763 (Counterclockwise)

Preceding gene: 18978374

Following gene: 33359587

Centisome position: 96.98

GC content: 39.22

Gene sequence:

>867_bases
GTGATAATTGAAATACTTGTAGCTGCTTTAGTTCTCTTCCTAGTTTTTACAGCCTTTGTGGGGTATAAAATGGTAAATCC
ACCTAGGGTAGTAGGGAATTGGACTCCAAAAGACCTTAGCTTTGAATACAAAGACGTTGAAATCACCACCGAAGACAACG
TTAAGCTTAGTGGGTGGTGGATAGATAATGGCAGCGACAAAACTGTAATTCCCCTACACGGTTATACCTCGAGCAGATGG
GCCGAGCACTACATGAGGCCCGTGATAGAGTTCCTCTTAAAAGAAGGGTACAATGTTTTGGCATTTGACTTTAGGGCCCA
TGGAAAAAGTGGAGGAAAATATACAACTGTTGGAGATAAGGAAATTCTGGACTTAAAGGCCGGTGTAAAGTGGTTAAAAG
ATAATTATCCAGAGAAATCTAAGAGAATTGGAGTGATTGGATTTTCAATGGGGGCATTAGTTGCAATTAGGGGATTAAGC
GAAGTTAAAGAAATTTGTTGCGGAGTTGCAGATTCACCACCAATATACCTAGATAAAACAGGAGCAAGAGGAATGAAGTA
TTTTGCAAAACTTCCAGAATGGCTTTATTCATTCGTTAAACCTTTTTCAGAACTATTTTCTGGTGGAAGGCCTATAAATG
TTCTTAATTATACAAATAGCATTAAGAAACCACTCTTTTTGATCATAGGTAGAAGAGATACACTCGTAAAAGTCGAGGAA
GTTCAAGAGTTTTACGAGAGAAACAAGCATGTAAATCCGAACGTTGAATTGTGGGTCACAGACGCTCCTCATGTAAGGAC
AATTCAAGTCTTTCCAGAAGAGTGGAAAAGTAGAGTTGGAGAGTTCCTTAAAAGGTGGATGGGATAA

Upstream 100 bases:

>100_bases
GCTGCAATAACCATGCAGTTCGTTAGGAGAGGGGACATCAAGGGTGGAAGTAGCGATATGTATGAGTACATACCAGATAT
GGACTAGGGGAGGGAGGTAG

Downstream 100 bases:

>100_bases
GTTTTTATTTTTTCATCCTAAATTTATCATCTATGAAAGCCAGAGTCCTGCTCCCTATTATCTTAGCATTTTACCTTTCT
TCCTCTCTATTCACCCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIIEILVAALVLFLVFTAFVGYKMVNPPRVVGNWTPKDLSFEYKDVEITTEDNVKLSGWWIDNGSDKTVIPLHGYTSSRW
AEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGDKEILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLS
EVKEICCGVADSPPIYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNSIKKPLFLIIGRRDTLVKVEE
VQEFYERNKHVNPNVELWVTDAPHVRTIQVFPEEWKSRVGEFLKRWMG

Sequences:

>Translated_288_residues
MIIEILVAALVLFLVFTAFVGYKMVNPPRVVGNWTPKDLSFEYKDVEITTEDNVKLSGWWIDNGSDKTVIPLHGYTSSRW
AEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGDKEILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLS
EVKEICCGVADSPPIYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNSIKKPLFLIIGRRDTLVKVEE
VQEFYERNKHVNPNVELWVTDAPHVRTIQVFPEEWKSRVGEFLKRWMG
>Mature_288_residues
MIIEILVAALVLFLVFTAFVGYKMVNPPRVVGNWTPKDLSFEYKDVEITTEDNVKLSGWWIDNGSDKTVIPLHGYTSSRW
AEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGDKEILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLS
EVKEICCGVADSPPIYLDKTGARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNSIKKPLFLIIGRRDTLVKVEE
VQEFYERNKHVNPNVELWVTDAPHVRTIQVFPEEWKSRVGEFLKRWMG

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 32965; Mature: 32965

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEILVAALVLFLVFTAFVGYKMVNPPRVVGNWTPKDLSFEYKDVEITTEDNVKLSGWW
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCEEEEEEE
IDNGSDKTVIPLHGYTSSRWAEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGDK
EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCH
EILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLSEVKEICCGVADSPPIYLDKT
HHHHHHHHHHHHHCCCCCHHCEEEEEEEHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECC
GARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNSIKKPLFLIIGRRDTLVKVEE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCEEEHHH
VQEFYERNKHVNPNVELWVTDAPHVRTIQVFPEEWKSRVGEFLKRWMG
HHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIEILVAALVLFLVFTAFVGYKMVNPPRVVGNWTPKDLSFEYKDVEITTEDNVKLSGWW
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCEEEEEEE
IDNGSDKTVIPLHGYTSSRWAEHYMRPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGDK
EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCH
EILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLSEVKEICCGVADSPPIYLDKT
HHHHHHHHHHHHHCCCCCHHCEEEEEEEHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECC
GARGMKYFAKLPEWLYSFVKPFSELFSGGRPINVLNYTNSIKKPLFLIIGRRDTLVKVEE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCEEEHHH
VQEFYERNKHVNPNVELWVTDAPHVRTIQVFPEEWKSRVGEFLKRWMG
HHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]