Click here to switch to the map view.

The map label for this gene is 18978359

Identifier: 18978359

GI number: 18978359

Start: 1838622

End: 1839035

Strand: Direct

Name: 18978359

Synonym: PF1987

Alternate gene names: NA

Gene position: 1838622-1839035 (Clockwise)

Preceding gene: 18978358

Following gene: 18978360

Centisome position: 96.35

GC content: 42.27

Gene sequence:

>414_bases
ATGGCTATACTTGGACATAACATAATAAGAGTAGAGTTTGAGAAAAACCCTGTTCCTGGGGGCCAGGTTGAGGTTTCGCT
AAACCCCAAGATTGAGGAGCTCAGGCTAGGGGAGATAAATCTTCCAAATGGCAAAGTTAAGGGTATAGAGGTGGAGCTAA
CGTACAATATCATTTATTCTCCCGAAGTTGGAAAGGGAATGATAAGAATGATCGTCTTTTATCTTCCCAGGAATAGAGAG
GATGTAGATAACATTCTCGACAACTGGGAGAAGGAGAAAAAGCTACCTGGAGAGCTCGTTGCTGAGGTAGTAAACTTTGC
AAACAACTTGCTGATTCCCTTCGCTATGATGATAACAAAGGAAATGGGAATGCCATCTCCAATTCCAATTCCTAGGGTTG
TAGTTAGACAGTAG

Upstream 100 bases:

>100_bases
CAAAACCCCCGTAGGGAGAACCCCTCACCAAAAGATTAGACTTTGAGGAAAAGATAACCTTAATAAGCTCCTGCACTTCT
TCTTTCTTTGGTGACGTGAA

Downstream 100 bases:

>100_bases
GGTGAAGTTTATATATTTTTGTTTACCAAATTTTTACCCAGAGTGTCAATTAACGGGGGGTTCGAAGTATGCTAAAGCTC
GTAGAGAATGTCGTTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAILGHNIIRVEFEKNPVPGGQVEVSLNPKIEELRLGEINLPNGKVKGIEVELTYNIIYSPEVGKGMIRMIVFYLPRNRE
DVDNILDNWEKEKKLPGELVAEVVNFANNLLIPFAMMITKEMGMPSPIPIPRVVVRQ

Sequences:

>Translated_137_residues
MAILGHNIIRVEFEKNPVPGGQVEVSLNPKIEELRLGEINLPNGKVKGIEVELTYNIIYSPEVGKGMIRMIVFYLPRNRE
DVDNILDNWEKEKKLPGELVAEVVNFANNLLIPFAMMITKEMGMPSPIPIPRVVVRQ
>Mature_136_residues
AILGHNIIRVEFEKNPVPGGQVEVSLNPKIEELRLGEINLPNGKVKGIEVELTYNIIYSPEVGKGMIRMIVFYLPRNRED
VDNILDNWEKEKKLPGELVAEVVNFANNLLIPFAMMITKEMGMPSPIPIPRVVVRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15519; Mature: 15387

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILGHNIIRVEFEKNPVPGGQVEVSLNPKIEELRLGEINLPNGKVKGIEVELTYNIIYS
CEEECCEEEEEEEECCCCCCCEEEEEECCCHHHEEECEEECCCCCEEEEEEEEEEEEEEC
PEVGKGMIRMIVFYLPRNREDVDNILDNWEKEKKLPGELVAEVVNFANNLLIPFAMMITK
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
EMGMPSPIPIPRVVVRQ
HCCCCCCCCCCCCEECC
>Mature Secondary Structure 
AILGHNIIRVEFEKNPVPGGQVEVSLNPKIEELRLGEINLPNGKVKGIEVELTYNIIYS
EEECCEEEEEEEECCCCCCCEEEEEECCCHHHEEECEEECCCCCEEEEEEEEEEEEEEC
PEVGKGMIRMIVFYLPRNREDVDNILDNWEKEKKLPGELVAEVVNFANNLLIPFAMMITK
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
EMGMPSPIPIPRVVVRQ
HCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA