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The map label for this gene is dtdA

Identifier: 18978354

GI number: 18978354

Start: 1832161

End: 1832973

Strand: Direct

Name: dtdA

Synonym: PF1982

Alternate gene names: 18978354

Gene position: 1832161-1832973 (Clockwise)

Preceding gene: 18978350

Following gene: 18978355

Centisome position: 96.01

GC content: 43.3

Gene sequence:

>813_bases
ATGAAGGTAATCATGACAACTAAGATTGACAAGGCTTCAATGAACATAAGGGAGAAGCTCATTGAAAACTTCGGCTTTAC
GGAGAGCAACCTCACATTCGATGGGAATAGGGTTTATGAGAAGGAAGACATCCTAATTCTCACCACAAACGAAGAGATGA
TATACTACGACTACCTCGACAAGGAGATTGAAAAGCAGACAAAGATAAAACCTGAGGTTATAGTTTTCGCATCTAGACAC
TCAAGTGCAAAAAAACTTCCTTCCCTAACCACCCATGTTACTGGAAACTGGGGAAAGGCAATGTATGGGGGAAAAGATGA
GAGCTTTGCCATAGCATTTCCAAGCGCGATGAAGTTAGCCCTACTAAAAATGCACGAACTAAACGACCTCGGTTGGACAG
TTTGTTATGAAGCAACTCACCACGGTCCAAGTGAACTGGAAGTCCCTAGCCTCTTCATAGAAATTGGATCCAGCGAAGAG
GAGTGGGTTAATGATAGAGCTGGAGAAATAATAGCCGAAACAATAATGTATGTCCTTAAAAAGAGGGAGAAGTTTAAGGT
CGCCCTAGGTATTGGAGGGGGACACTATGCTCCAAAGCAGACAAAGGTAGCACTTGAAAGTGACCTTGCATTCTCCCACA
TTCTCCCAAAATACGCACAGCCAGTGAAGAAGGAAGTTATCCTTCGCGCACTTTCAAGGTCGACTGAGGAAGTTGAGGCA
ATATACGTTGACTGGAAGGGAAGTAGGGGAGAGACTAGACAACTAGCTAAGGAATTAGCAAATGAGCTGGGGCTTGAATT
TATAAAGGATTAA

Upstream 100 bases:

>100_bases
CAAACCCTAACAACCTTTTCCCTGGGCATCAATATTACTACTTTTTCCCCATTTAATAATGTTTTTAACGAAGAAAGCTT
CCTTGAATGGGGGGAGATAA

Downstream 100 bases:

>100_bases
TTTCATCTGAATAGTTTATTTCTTTATGCGTGCTCAAAGTAATAAGTATGAGTTCAATTTTATCACTATGTTTGTTTTTT
ATATAGAAATGTTTTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKVIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLDKEIEKQTKIKPEVIVFASRH
SSAKKLPSLTTHVTGNWGKAMYGGKDESFAIAFPSAMKLALLKMHELNDLGWTVCYEATHHGPSELEVPSLFIEIGSSEE
EWVNDRAGEIIAETIMYVLKKREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTEEVEA
IYVDWKGSRGETRQLAKELANELGLEFIKD

Sequences:

>Translated_270_residues
MKVIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLDKEIEKQTKIKPEVIVFASRH
SSAKKLPSLTTHVTGNWGKAMYGGKDESFAIAFPSAMKLALLKMHELNDLGWTVCYEATHHGPSELEVPSLFIEIGSSEE
EWVNDRAGEIIAETIMYVLKKREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTEEVEA
IYVDWKGSRGETRQLAKELANELGLEFIKD
>Mature_270_residues
MKVIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLDKEIEKQTKIKPEVIVFASRH
SSAKKLPSLTTHVTGNWGKAMYGGKDESFAIAFPSAMKLALLKMHELNDLGWTVCYEATHHGPSELEVPSLFIEIGSSEE
EWVNDRAGEIIAETIMYVLKKREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTEEVEA
IYVDWKGSRGETRQLAKELANELGLEFIKD

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_PYRFU (P58852)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579711.1
- ProteinModelPortal:   P58852
- SMR:   P58852
- EnsemblBacteria:   EBPYRT00000005658
- GeneID:   1469864
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1982
- NMPDR:   fig|186497.1.peg.2034
- GeneTree:   EBGT00050000022942
- HOGENOM:   HBG626914
- OMA:   CYEATHH
- ProtClustDB:   PRK03995
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 30613; Mature: 30613

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLD
CEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCEEEEEECCCEEEEEHHH
KEIEKQTKIKPEVIVFASRHSSAKKLPSLTTHVTGNWGKAMYGGKDESFAIAFPSAMKLA
HHHHHHHCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHH
LLKMHELNDLGWTVCYEATHHGPSELEVPSLFIEIGSSEEEWVNDRAGEIIAETIMYVLK
HHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
KREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTEEVEA
CCCEEEEEEEECCCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IYVDWKGSRGETRQLAKELANELGLEFIKD
EEEEECCCCCHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MKVIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLD
CEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCEEEEEECCCEEEEEHHH
KEIEKQTKIKPEVIVFASRHSSAKKLPSLTTHVTGNWGKAMYGGKDESFAIAFPSAMKLA
HHHHHHHCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHH
LLKMHELNDLGWTVCYEATHHGPSELEVPSLFIEIGSSEEEWVNDRAGEIIAETIMYVLK
HHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
KREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTEEVEA
CCCEEEEEEEECCCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IYVDWKGSRGETRQLAKELANELGLEFIKD
EEEEECCCCCHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA