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The map label for this gene is 18978317

Identifier: 18978317

GI number: 18978317

Start: 1798437

End: 1799051

Strand: Reverse

Name: 18978317

Synonym: PF1945

Alternate gene names: NA

Gene position: 1799051-1798437 (Counterclockwise)

Preceding gene: 18978321

Following gene: 18978314

Centisome position: 94.28

GC content: 38.54

Gene sequence:

>615_bases
ATGCTGTTAGCTTATTCCATGAAAGTGGTTTATCATCTCTTTAGTGGGGGAAAAGACTCTTCACTTGCGGCATGGATACT
CAAAAAATTAGGATATGAGGTTAAGCTAATAACGATAACCTTTGGAGTCTTAGATAATTGGAAGTTTGCAAGAGAAACGG
CGGAAATACTTGGTTTTGACCATGAAGTTATAGAAATGCCAATAGGGATCTTAGAGAAAGCTACGGAAATGTGCATAAAG
GAAGGAAGGGCGGGAAATGCAATCCAATACATTCATGAAAGAGCTCTTGAATATATCGCTTCCCGTGAAGAAGTGAAAAG
GATTAGTGATGGAACTAGGAGAGATGATAGAGTGCCATTTTTAGACTTATCAAAGGCAAGATCACTTGAAGATAGATATA
ATGTGGCGTATATTCGGCCTCTTCTCGGATTAGGGTACAAAACAATTAGAGAGCTTGTAAATGAAATATTTGTTGTTGTT
GAGGATGAAAGCGAAAAGGTTCAAAAGGGGGATTATGAGACGGAATTAAGAGAGTTGATAAGAAGAAAAGGACATGATCC
AAGTCAAATATTTCCCAAGCGTCACGTTCAGTCTAGGGTTGTTGGGTTGAGATGA

Upstream 100 bases:

>100_bases
ATCTTCCCCCAAGTTTTACTAACGTGAAATAATATTTAAAGGTTGCTAAATGTAAAGAATTTGGACATTTTATCCTAAAC
AAGGCAAGATTTTTATTTAA

Downstream 100 bases:

>100_bases
TGAACTCGGCAGGTCCTGAAGGATGATGAGGATCTTGAGTGCTGATCACCTAACTATTATACTTAGTCTCCCTATCTTAA
ACTGTACACCTGTTTCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLLAYSMKVVYHLFSGGKDSSLAAWILKKLGYEVKLITITFGVLDNWKFARETAEILGFDHEVIEMPIGILEKATEMCIK
EGRAGNAIQYIHERALEYIASREEVKRISDGTRRDDRVPFLDLSKARSLEDRYNVAYIRPLLGLGYKTIRELVNEIFVVV
EDESEKVQKGDYETELRELIRRKGHDPSQIFPKRHVQSRVVGLR

Sequences:

>Translated_204_residues
MLLAYSMKVVYHLFSGGKDSSLAAWILKKLGYEVKLITITFGVLDNWKFARETAEILGFDHEVIEMPIGILEKATEMCIK
EGRAGNAIQYIHERALEYIASREEVKRISDGTRRDDRVPFLDLSKARSLEDRYNVAYIRPLLGLGYKTIRELVNEIFVVV
EDESEKVQKGDYETELRELIRRKGHDPSQIFPKRHVQSRVVGLR
>Mature_204_residues
MLLAYSMKVVYHLFSGGKDSSLAAWILKKLGYEVKLITITFGVLDNWKFARETAEILGFDHEVIEMPIGILEKATEMCIK
EGRAGNAIQYIHERALEYIASREEVKRISDGTRRDDRVPFLDLSKARSLEDRYNVAYIRPLLGLGYKTIRELVNEIFVVV
EDESEKVQKGDYETELRELIRRKGHDPSQIFPKRHVQSRVVGLR

Specific function: Unknown

COG id: COG2117

COG function: function code J; Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001962
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00733 Asn_synthase [H]

EC number: NA

Molecular weight: Translated: 23573; Mature: 23573

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAYSMKVVYHLFSGGKDSSLAAWILKKLGYEVKLITITFGVLDNWKFARETAEILGFD
CEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECHHCCHHHHHHHHHHHCCC
HEVIEMPIGILEKATEMCIKEGRAGNAIQYIHERALEYIASREEVKRISDGTRRDDRVPF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LDLSKARSLEDRYNVAYIRPLLGLGYKTIRELVNEIFVVVEDESEKVQKGDYETELRELI
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHCCCHHHHHHHHH
RRKGHDPSQIFPKRHVQSRVVGLR
HHCCCCCHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MLLAYSMKVVYHLFSGGKDSSLAAWILKKLGYEVKLITITFGVLDNWKFARETAEILGFD
CEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECHHCCHHHHHHHHHHHCCC
HEVIEMPIGILEKATEMCIKEGRAGNAIQYIHERALEYIASREEVKRISDGTRRDDRVPF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LDLSKARSLEDRYNVAYIRPLLGLGYKTIRELVNEIFVVVEDESEKVQKGDYETELRELI
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHCCCHHHHHHHHH
RRKGHDPSQIFPKRHVQSRVVGLR
HHCCCCCHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]