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The map label for this gene is 18978312

Identifier: 18978312

GI number: 18978312

Start: 1792853

End: 1793353

Strand: Reverse

Name: 18978312

Synonym: PF1940

Alternate gene names: NA

Gene position: 1793353-1792853 (Counterclockwise)

Preceding gene: 33359584

Following gene: 33359583

Centisome position: 93.98

GC content: 35.73

Gene sequence:

>501_bases
ATGAATGGTGAAATTATAGCAAGAAGAGCATCTTCTTGGGAGATAGATCTCATACTCAAAGAAGCGGAAAAATTTGGGAC
ACTTGTCCATAATTTTTTTGCCATAGTTGAAGGGAAATATCGAGACGTTTATGCGGTAAATAATGAAGTTTGGAAGATTA
TTGAGGATTTAACAGTGAGACCTTTTGCGCTAGGAACCTTTGTAGGGATGATAAAAGTTGACGAGAACCTCGTTGAGAAA
TTTTATCCAGCCATAGAGTTCTTTACCTTTGTTGATATTGAAAAGAACTATGCTGTTCTTGGCCCTAAGGCATCTTTTCT
GTTTACTACTGGAAAAGACGTTCCTAAAAAAGCAGTGAGAAAGCTAGTTTGGAAAGGAAGCAAAAAAATTGTAGTTATGA
ACGAGTTAGGGGACGTTCTTGGAATAGGAAGAATAAACCCAAGTAACGAGGAAAAGTTCATAAAAAATATAACAGATGTA
GGAGCATTTCTAAGAAAATAA

Upstream 100 bases:

>100_bases
GAGGAGTGGGAAGACTGGGAGGAAGAAGAATACGAGGAAGATTGGGAAGAAGATTGGGACGAAGAGTGGGAAGAGGAGGA
GTGGGAGGAAGAAGAAGAGG

Downstream 100 bases:

>100_bases
CTATTACTTAGCTTCCTGCTTCCCTGGGAAAGAAGCGAATTCAACTGTTCCTCTTTGCCTTACGGGTTGCTTATAGCCAT
AAGTGCGTAGACCTCTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNGEIIARRASSWEIDLILKEAEKFGTLVHNFFAIVEGKYRDVYAVNNEVWKIIEDLTVRPFALGTFVGMIKVDENLVEK
FYPAIEFFTFVDIEKNYAVLGPKASFLFTTGKDVPKKAVRKLVWKGSKKIVVMNELGDVLGIGRINPSNEEKFIKNITDV
GAFLRK

Sequences:

>Translated_166_residues
MNGEIIARRASSWEIDLILKEAEKFGTLVHNFFAIVEGKYRDVYAVNNEVWKIIEDLTVRPFALGTFVGMIKVDENLVEK
FYPAIEFFTFVDIEKNYAVLGPKASFLFTTGKDVPKKAVRKLVWKGSKKIVVMNELGDVLGIGRINPSNEEKFIKNITDV
GAFLRK
>Mature_166_residues
MNGEIIARRASSWEIDLILKEAEKFGTLVHNFFAIVEGKYRDVYAVNNEVWKIIEDLTVRPFALGTFVGMIKVDENLVEK
FYPAIEFFTFVDIEKNYAVLGPKASFLFTTGKDVPKKAVRKLVWKGSKKIVVMNELGDVLGIGRINPSNEEKFIKNITDV
GAFLRK

Specific function: Unknown

COG id: COG1374

COG function: function code J; Protein involved in ribosomal biogenesis, contains PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0113 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005155 [H]

Pfam domain/function: PF03657 UPF0113 [H]

EC number: NA

Molecular weight: Translated: 18878; Mature: 18878

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGEIIARRASSWEIDLILKEAEKFGTLVHNFFAIVEGKYRDVYAVNNEVWKIIEDLTVR
CCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC
PFALGTFVGMIKVDENLVEKFYPAIEFFTFVDIEKNYAVLGPKASFLFTTGKDVPKKAVR
CCHHHHHHHHHEECHHHHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCHHHHHH
KLVWKGSKKIVVMNELGDVLGIGRINPSNEEKFIKNITDVGAFLRK
HHHHCCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGEIIARRASSWEIDLILKEAEKFGTLVHNFFAIVEGKYRDVYAVNNEVWKIIEDLTVR
CCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC
PFALGTFVGMIKVDENLVEKFYPAIEFFTFVDIEKNYAVLGPKASFLFTTGKDVPKKAVR
CCHHHHHHHHHEECHHHHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCHHHHHH
KLVWKGSKKIVVMNELGDVLGIGRINPSNEEKFIKNITDVGAFLRK
HHHHCCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]