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The map label for this gene is rnp3

Identifier: 18978286

GI number: 18978286

Start: 1764755

End: 1765399

Strand: Direct

Name: rnp3

Synonym: PF1914

Alternate gene names: 18978286

Gene position: 1764755-1765399 (Clockwise)

Preceding gene: 18978285

Following gene: 33359582

Centisome position: 92.48

GC content: 39.84

Gene sequence:

>645_bases
ATGGCTGGAGGGAGAAATGGAGTGAAGTTTGTAGAGATGGACATTAGAAGCAGAGAAGCTTATGAACTTGCTGAGGAGTG
GTTCGATGATGTTGTTTTTTCGTATGAAATCCCTCCAGGAGTTTTAGATAAAGAGAGACTTAAAGAAATTAAGAAAGAAT
ACGGAAATGTTGCGATTACTTTAATTAATCCAAAGCCTTCTCTCGTAAAAGAGGCTGTTCAGAGATTTAAACAAAATTAT
CTAATCTACGTGGAAAGCAGCGATCTCAGAGTTGTGAGGTATTCCATCGAGAGAGGTGTAGACGCAGTTATATCCCCCTG
GGCAAATAGGAAGGATCAAGGCATTGACCATGTCTTGGCTAGGATGATGAATAAGAGAGGGGTGGCCCTGGGATTCTCTC
TAAGGCCTCTTTTACATCAAAATCCATATGAGAGGGCAAATGCATTAAAATTCATGAGAAAGGCATGGACACTCGTAAAT
AAATATAAGGTTCCACGATTTATTTCTTCCTCAGCTAAGGGAAAATTTCAAGTCAGAGGAGTAAAAGAATTGATCAGCTT
GGGGATAGCAATTGGGATGGAAGAGGTACAAGCCAAAGCATCACTCTCCTTTTATCCACTTGGAATTCTGGAAAGACTTA
AATAA

Upstream 100 bases:

>100_bases
GAGAGGTAAAGGTCAGTGAAGGAGAGGATGTTATTCATTTAAGAATTAAGGTCAAAGCATTTCCAATGAGGAAGGAAAGC
GTTGTTGAAGCAGTGAAGAA

Downstream 100 bases:

>100_bases
CATTTTTATTTATCCAAACTATAAAGGAGGGTGGGGATTTGGAGATAGATCCAATGTTTTCTCCTCCTGAGGAAATTGAG
AGAGAAGCTAGAAAGCTATT

Product: ribonuclease P protein component 3

Products: NA

Alternate protein names: RNase P component 3

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MAGGRNGVKFVEMDIRSREAYELAEEWFDDVVFSYEIPPGVLDKERLKEIKKEYGNVAITLINPKPSLVKEAVQRFKQNY
LIYVESSDLRVVRYSIERGVDAVISPWANRKDQGIDHVLARMMNKRGVALGFSLRPLLHQNPYERANALKFMRKAWTLVN
KYKVPRFISSSAKGKFQVRGVKELISLGIAIGMEEVQAKASLSFYPLGILERLK

Sequences:

>Translated_214_residues
MAGGRNGVKFVEMDIRSREAYELAEEWFDDVVFSYEIPPGVLDKERLKEIKKEYGNVAITLINPKPSLVKEAVQRFKQNY
LIYVESSDLRVVRYSIERGVDAVISPWANRKDQGIDHVLARMMNKRGVALGFSLRPLLHQNPYERANALKFMRKAWTLVN
KYKVPRFISSSAKGKFQVRGVKELISLGIAIGMEEVQAKASLSFYPLGILERLK
>Mature_213_residues
AGGRNGVKFVEMDIRSREAYELAEEWFDDVVFSYEIPPGVLDKERLKEIKKEYGNVAITLINPKPSLVKEAVQRFKQNYL
IYVESSDLRVVRYSIERGVDAVISPWANRKDQGIDHVLARMMNKRGVALGFSLRPLLHQNPYERANALKFMRKAWTLVNK
YKVPRFISSSAKGKFQVRGVKELISLGIAIGMEEVQAKASLSFYPLGILERLK

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1603

COG function: function code J; RNase P/RNase MRP subunit p30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 3 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP3_PYRFU (Q8TZS0)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579643.1
- ProteinModelPortal:   Q8TZS0
- SMR:   Q8TZS0
- IntAct:   Q8TZS0
- EnsemblBacteria:   EBPYRT00000006010
- GeneID:   1469794
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1914
- NMPDR:   fig|186497.1.peg.1964
- GeneTree:   EBGT00050000022696
- HOGENOM:   HBG645643
- OMA:   WFDEVVF
- ProtClustDB:   PRK03892
- BRENDA:   3.1.26.5
- HAMAP:   MF_00756
- InterPro:   IPR016195
- InterPro:   IPR002738

Pfam domain/function: PF01876 RNase_P_p30; SSF89550 PHP-like

EC number: =3.1.26.5

Molecular weight: Translated: 24495; Mature: 24364

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGRNGVKFVEMDIRSREAYELAEEWFDDVVFSYEIPPGVLDKERLKEIKKEYGNVAIT
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCEEEE
LINPKPSLVKEAVQRFKQNYLIYVESSDLRVVRYSIERGVDAVISPWANRKDQGIDHVLA
EECCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHCHHHHHCCCCCCCCCCHHHHHH
RMMNKRGVALGFSLRPLLHQNPYERANALKFMRKAWTLVNKYKVPRFISSSAKGKFQVRG
HHHHCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEHH
VKELISLGIAIGMEEVQAKASLSFYPLGILERLK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure 
AGGRNGVKFVEMDIRSREAYELAEEWFDDVVFSYEIPPGVLDKERLKEIKKEYGNVAIT
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCEEEE
LINPKPSLVKEAVQRFKQNYLIYVESSDLRVVRYSIERGVDAVISPWANRKDQGIDHVLA
EECCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHCHHHHHCCCCCCCCCCHHHHHH
RMMNKRGVALGFSLRPLLHQNPYERANALKFMRKAWTLVNKYKVPRFISSSAKGKFQVRG
HHHHCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEHH
VKELISLGIAIGMEEVQAKASLSFYPLGILERLK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA