| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18978280
Identifier: 18978280
GI number: 18978280
Start: 1759342
End: 1760193
Strand: Direct
Name: 18978280
Synonym: PF1908
Alternate gene names: NA
Gene position: 1759342-1760193 (Clockwise)
Preceding gene: 18978279
Following gene: 18978284
Centisome position: 92.2
GC content: 33.92
Gene sequence:
>852_bases ATGAGAGCAAAGAAAATTAGTATTTTCATATTTCTTTTTCTTATTGGAGCGAGCTACATTTATTCACATGTTCCAAACGA GAGTGTATTTCTAGTCCCAGATGCTTACATTTATGGTGAACTCAATGACACAGTGCTAATTAGGGTCTACTGGATTGGAA CAGATTTCAAAGAATATAACATTATAAAGAACTCTAATTTAAGCATTATAGGTTTAGATGGCTTTGCGACACTTAAAAAA GCTAAGATAAAAGAAACACTAAAGTACCATGATCCAATGATTAGGGAGTTAACATTCGGAATATATCTCACGTTAAACAA AACAGGTATTTATAAGAAGAATGTCACCCTGATAATAGAGAATAAAAAAGAAAGTTACCATAAAGAACTCAGTGCGAAAT GGATCTTTGAAATTTCTCCCAAGCAGAATCATTCTCTAAAGATAACTGATATGATTGAACTAGAAGTGGGCTTTTTTGGG AGAAATGTTTCTCCCGAGTGTATGTTTGCAGTGAAAAACATAGGTACACAACCGCTAACTGTATTAGGGGTTCAATACAA CATATCTGATCTTCAAATTGAGGAGGTAACATACATCAATGCAACTAATCTTGACGAAATCGAGAACAATACAAAAGAAA TCAGATTACCACTAAAAGGACTAACACTTAACCCTAATGAAAGCAAAGTTATAATAGTCCACTTTAAAAAGGACGATTTC AGGTACCCAAGAAAGCCAGCCGCAATTAGATTTAAGATAGTCTACAAAGAAAAAGACAAAATTTATGCAATTCCACTTGT ATATACCTACGAGATCGTGCCAATTCCAGCTCCAGAGCAACTTAAAGAATGA
Upstream 100 bases:
>100_bases ATGGACAAAATTATCCAACTGGAGAAATAAAAAAAGCATTGGTTAAAAAGTTCCTATTTTATCAAGTACGAGTCAAACCT CTAAATTGAAGGTGAATAAT
Downstream 100 bases:
>100_bases GTATATTTTACTTCTCTTCCCCTTCTTTATGCTTCCCATTTTATTCCTTGAGATATAAAAATATAAATGAAAAAGAAATC AAGCCTCCTCAATAGTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRAKKISIFIFLFLIGASYIYSHVPNESVFLVPDAYIYGELNDTVLIRVYWIGTDFKEYNIIKNSNLSIIGLDGFATLKK AKIKETLKYHDPMIRELTFGIYLTLNKTGIYKKNVTLIIENKKESYHKELSAKWIFEISPKQNHSLKITDMIELEVGFFG RNVSPECMFAVKNIGTQPLTVLGVQYNISDLQIEEVTYINATNLDEIENNTKEIRLPLKGLTLNPNESKVIIVHFKKDDF RYPRKPAAIRFKIVYKEKDKIYAIPLVYTYEIVPIPAPEQLKE
Sequences:
>Translated_283_residues MRAKKISIFIFLFLIGASYIYSHVPNESVFLVPDAYIYGELNDTVLIRVYWIGTDFKEYNIIKNSNLSIIGLDGFATLKK AKIKETLKYHDPMIRELTFGIYLTLNKTGIYKKNVTLIIENKKESYHKELSAKWIFEISPKQNHSLKITDMIELEVGFFG RNVSPECMFAVKNIGTQPLTVLGVQYNISDLQIEEVTYINATNLDEIENNTKEIRLPLKGLTLNPNESKVIIVHFKKDDF RYPRKPAAIRFKIVYKEKDKIYAIPLVYTYEIVPIPAPEQLKE >Mature_283_residues MRAKKISIFIFLFLIGASYIYSHVPNESVFLVPDAYIYGELNDTVLIRVYWIGTDFKEYNIIKNSNLSIIGLDGFATLKK AKIKETLKYHDPMIRELTFGIYLTLNKTGIYKKNVTLIIENKKESYHKELSAKWIFEISPKQNHSLKITDMIELEVGFFG RNVSPECMFAVKNIGTQPLTVLGVQYNISDLQIEEVTYINATNLDEIENNTKEIRLPLKGLTLNPNESKVIIVHFKKDDF RYPRKPAAIRFKIVYKEKDKIYAIPLVYTYEIVPIPAPEQLKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32783; Mature: 32783
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAKKISIFIFLFLIGASYIYSHVPNESVFLVPDAYIYGELNDTVLIRVYWIGTDFKEYN CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCEEEEEEEEEECCCHHEE IIKNSNLSIIGLDGFATLKKAKIKETLKYHDPMIRELTFGIYLTLNKTGIYKKNVTLIIE EEECCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEECCCEEECCEEEEEE NKKESYHKELSAKWIFEISPKQNHSLKITDMIELEVGFFGRNVSPECMFAVKNIGTQPLT CCCHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCHHHEEEEHHCCCCCEE VLGVQYNISDLQIEEVTYINATNLDEIENNTKEIRLPLKGLTLNPNESKVIIVHFKKDDF EEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCC RYPRKPAAIRFKIVYKEKDKIYAIPLVYTYEIVPIPAPEQLKE CCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCHHHHCC >Mature Secondary Structure MRAKKISIFIFLFLIGASYIYSHVPNESVFLVPDAYIYGELNDTVLIRVYWIGTDFKEYN CCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCEEEEEEEEEECCCHHEE IIKNSNLSIIGLDGFATLKKAKIKETLKYHDPMIRELTFGIYLTLNKTGIYKKNVTLIIE EEECCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEECCCEEECCEEEEEE NKKESYHKELSAKWIFEISPKQNHSLKITDMIELEVGFFGRNVSPECMFAVKNIGTQPLT CCCHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCHHHEEEEHHCCCCCEE VLGVQYNISDLQIEEVTYINATNLDEIENNTKEIRLPLKGLTLNPNESKVIIVHFKKDDF EEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCC RYPRKPAAIRFKIVYKEKDKIYAIPLVYTYEIVPIPAPEQLKE CCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA