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The map label for this gene is yejH [C]

Identifier: 18978274

GI number: 18978274

Start: 1751962

End: 1753305

Strand: Reverse

Name: yejH [C]

Synonym: PF1902

Alternate gene names: 18978274

Gene position: 1753305-1751962 (Counterclockwise)

Preceding gene: 18978281

Following gene: 18978272

Centisome position: 91.88

GC content: 39.51

Gene sequence:

>1344_bases
GTGAAGGTTGAATTATATTATGACAAGGGGACAGTTCTCATTAAGGGAAGGGTTCACATTCCCATGGCCAAGTGGGATGA
AAGAGTGAAAGCATATAGAGCTTTGGCCTACAAGTATAAGGATATTGTAGAGTTTCTAAAGTCGGAAGGTGTTGATTTTG
AGGATCATGTCATAGATAACATTATTCCATCTCCAATTTACGATGTTGAGTTTGACTTTGAGCTTAGGGATTATCAAAGA
GAGGCTGTAAAGAAGTTCATGAGAGTGGGGCGAGGAATAATAGTACTGCCTACTGGGGCTGGGAAGACGATAGTAGCTCT
GGAGATCATTAGGAGGTTGTCGGTTTCTACTTTGGTAGTTGTACCAACTTTGGCCCTTCTTGAGCAGTGGAAGGAAAGAT
TGTCCATATTTGGAGAAATTGGAGAGTTTTCGGGGAGAAAAAAAGAACTAAAGCCAATAACTGTAACTACTTATGATTCT
GCTTACATAAATGCTGAGCTCCTTGGGGATAAATTTCTCTTCCTTGTATTTGATGAGTGCCATCATCTACCATCTGAAGC
TTATAGAAACATAGCCCAGATGAGCATCGCCCCCTATAGGCTTGGATTGACTGCCTTTCCCGAAAGAGCTGACAATCTTC
ATGAGTTGTTTCCCGAGTTGATAGGTGGAATAATCTATGAGAAAAGGCCCTCTGAACTTGTTGGAAAATACCTTGCAAAC
TATGAGGTTGTGAGGATCCATGTTCCCTTAACAAGGGAAGAAAGGGAGGAGTATAGGAAATATTATGAGAGGTTTAAGAG
ATATGTTGAAAAGAGGGGAATTCAGTTTACCAGCCTAAAAGATTTCCAGCGGATAGTTTTGAGTACTGCAAATGATAATG
AGGCATTTAAAGCCCTAAGAGCCTTAGAACAGGCAAGAAAAATTGCTTTTAATTCAACTAAAAAGCTAGAGAAGCTCAGA
GAAATTCTTGAGCGGCATAGGGGAGAGAAGATAATAATCTTTACTAGGCACAATGATTTAGTCTACTTAATATCTAGAAA
GTTCTTGATTCCTGCGATAACTCACAAAACCTATAAAGCGGAGAGAAGTGAGATTCTAAGAAAGTTTAGAAAAGGAGCAT
ATAAAGCAATAGTGAGTAGTCAAGTTCTCGATGAAGGAATAGATGTTCCTGATGCCAGTGTGGGAGTTATAATCAGTGGT
ACTGGATCTTCTAGAGAATTTATCCAGAGGCTTGGGAGGATATTAAGACCGGCTCCAGGAAAGGAAAAGGCAATATTGTA
TGAACTAATTTCTTCTGGGACTAGTGAGGTTAGAATATCAAAAAGAAGAAGGTCAAGTATTTAG

Upstream 100 bases:

>100_bases
TAAATCTTCCCTCTTCTTCTTGTTGCATCTAAAAGTTCCTTAGGCAACACATCGCTTATAGGGTAAAGGGATTTAAAAGG
AATTTCTCAACCCTGGGAAT

Downstream 100 bases:

>100_bases
CTCGGCGTCAAACCTATTTGTCCTCTTGTAATCTGCATACCTCTTGTCGAGTCTCTTGCTTACATATGGTCCATCTTTTC
TATAGCCGAATTTTCTGTAG

Product: DNA repair helicase putative

Products: NA

Alternate protein names: DNA Repair Helicase; Type III Restriction Res Subunit; Helicase Domain Protein; Helicase Domain-Containing Protein; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; Helicase; DNA Repair Helicase Rad; Superfamily II DNA/RNA Helicase; DNA Helicase; DNA Repair Protein RAD; DNA/RNA Helicase; Type III Restriction Res Subunit Family; DNA Repair Protein Rad; DNA Repair Protein; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily II; Helicase ATP-Dependent; Helicase DNA Repair; DNA Or RNA Helicase; Helicase DNA Repair Rad; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction Endonuclease Family Protein; XPB/RAD25-Related Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; ATP-Dependet DEAD/DEAH Box Helicase; DEAD/DEAH Box Helicase-Like; DNA/RNA Repair Helicase; DNA Or RNA Helicase Of Superfamily Protein II; DEAD/DEAH Box Helicase

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MKVELYYDKGTVLIKGRVHIPMAKWDERVKAYRALAYKYKDIVEFLKSEGVDFEDHVIDNIIPSPIYDVEFDFELRDYQR
EAVKKFMRVGRGIIVLPTGAGKTIVALEIIRRLSVSTLVVVPTLALLEQWKERLSIFGEIGEFSGRKKELKPITVTTYDS
AYINAELLGDKFLFLVFDECHHLPSEAYRNIAQMSIAPYRLGLTAFPERADNLHELFPELIGGIIYEKRPSELVGKYLAN
YEVVRIHVPLTREEREEYRKYYERFKRYVEKRGIQFTSLKDFQRIVLSTANDNEAFKALRALEQARKIAFNSTKKLEKLR
EILERHRGEKIIIFTRHNDLVYLISRKFLIPAITHKTYKAERSEILRKFRKGAYKAIVSSQVLDEGIDVPDASVGVIISG
TGSSREFIQRLGRILRPAPGKEKAILYELISSGTSEVRISKRRRSSI

Sequences:

>Translated_447_residues
MKVELYYDKGTVLIKGRVHIPMAKWDERVKAYRALAYKYKDIVEFLKSEGVDFEDHVIDNIIPSPIYDVEFDFELRDYQR
EAVKKFMRVGRGIIVLPTGAGKTIVALEIIRRLSVSTLVVVPTLALLEQWKERLSIFGEIGEFSGRKKELKPITVTTYDS
AYINAELLGDKFLFLVFDECHHLPSEAYRNIAQMSIAPYRLGLTAFPERADNLHELFPELIGGIIYEKRPSELVGKYLAN
YEVVRIHVPLTREEREEYRKYYERFKRYVEKRGIQFTSLKDFQRIVLSTANDNEAFKALRALEQARKIAFNSTKKLEKLR
EILERHRGEKIIIFTRHNDLVYLISRKFLIPAITHKTYKAERSEILRKFRKGAYKAIVSSQVLDEGIDVPDASVGVIISG
TGSSREFIQRLGRILRPAPGKEKAILYELISSGTSEVRISKRRRSSI
>Mature_447_residues
MKVELYYDKGTVLIKGRVHIPMAKWDERVKAYRALAYKYKDIVEFLKSEGVDFEDHVIDNIIPSPIYDVEFDFELRDYQR
EAVKKFMRVGRGIIVLPTGAGKTIVALEIIRRLSVSTLVVVPTLALLEQWKERLSIFGEIGEFSGRKKELKPITVTTYDS
AYINAELLGDKFLFLVFDECHHLPSEAYRNIAQMSIAPYRLGLTAFPERADNLHELFPELIGGIIYEKRPSELVGKYLAN
YEVVRIHVPLTREEREEYRKYYERFKRYVEKRGIQFTSLKDFQRIVLSTANDNEAFKALRALEQARKIAFNSTKKLEKLR
EILERHRGEKIIIFTRHNDLVYLISRKFLIPAITHKTYKAERSEILRKFRKGAYKAIVSSQVLDEGIDVPDASVGVIISG
TGSSREFIQRLGRILRPAPGKEKAILYELISSGTSEVRISKRRRSSI

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=420, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1788511, Length=378, Percent_Identity=26.7195767195767, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17556358, Length=423, Percent_Identity=27.1867612293144, Blast_Score=112, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6322048, Length=419, Percent_Identity=28.4009546539379, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI221331068, Length=411, Percent_Identity=28.2238442822384, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24662247, Length=411, Percent_Identity=28.2238442822384, Blast_Score=115, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51759; Mature: 51759

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVELYYDKGTVLIKGRVHIPMAKWDERVKAYRALAYKYKDIVEFLKSEGVDFEDHVIDN
CEEEEEECCCEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IIPSPIYDVEFDFELRDYQREAVKKFMRVGRGIIVLPTGAGKTIVALEIIRRLSVSTLVV
CCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
VPTLALLEQWKERLSIFGEIGEFSGRKKELKPITVTTYDSAYINAELLGDKFLFLVFDEC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHCCCEEEEEEEHHH
HHLPSEAYRNIAQMSIAPYRLGLTAFPERADNLHELFPELIGGIIYEKRPSELVGKYLAN
HCCHHHHHHHHHHHCCCCCEECCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
YEVVRIHVPLTREEREEYRKYYERFKRYVEKRGIQFTSLKDFQRIVLSTANDNEAFKALR
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCHHHHHHHH
ALEQARKIAFNSTKKLEKLREILERHRGEKIIIFTRHNDLVYLISRKFLIPAITHKTYKA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
ERSEILRKFRKGAYKAIVSSQVLDEGIDVPDASVGVIISGTGSSREFIQRLGRILRPAPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
KEKAILYELISSGTSEVRISKRRRSSI
CCHHHHHHHHHCCCCCEEEHHHHHCCC
>Mature Secondary Structure
MKVELYYDKGTVLIKGRVHIPMAKWDERVKAYRALAYKYKDIVEFLKSEGVDFEDHVIDN
CEEEEEECCCEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IIPSPIYDVEFDFELRDYQREAVKKFMRVGRGIIVLPTGAGKTIVALEIIRRLSVSTLVV
CCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
VPTLALLEQWKERLSIFGEIGEFSGRKKELKPITVTTYDSAYINAELLGDKFLFLVFDEC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHCCCEEEEEEEHHH
HHLPSEAYRNIAQMSIAPYRLGLTAFPERADNLHELFPELIGGIIYEKRPSELVGKYLAN
HCCHHHHHHHHHHHCCCCCEECCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
YEVVRIHVPLTREEREEYRKYYERFKRYVEKRGIQFTSLKDFQRIVLSTANDNEAFKALR
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCHHHHHHHH
ALEQARKIAFNSTKKLEKLREILERHRGEKIIIFTRHNDLVYLISRKFLIPAITHKTYKA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
ERSEILRKFRKGAYKAIVSSQVLDEGIDVPDASVGVIISGTGSSREFIQRLGRILRPAPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
KEKAILYELISSGTSEVRISKRRRSSI
CCHHHHHHHHHCCCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA