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The map label for this gene is srp19

Identifier: 18978266

GI number: 18978266

Start: 1745899

End: 1746201

Strand: Reverse

Name: srp19

Synonym: PF1894

Alternate gene names: 18978266

Gene position: 1746201-1745899 (Counterclockwise)

Preceding gene: 33359581

Following gene: 18978264

Centisome position: 91.51

GC content: 39.6

Gene sequence:

>303_bases
ATGGGAAGGTTTGTAGTATGGCCAAGTGAGCTTGACTCAAGATTGTCAAGGAAGTATGGTAGAATAGTTCCCAGGTCGAT
AGCAGTCGAAAGTCCTAGGGTAGAGGAAATAGTAAGGGCTGCTGAGGAATTAAAGTTCAAAGTTATTAGAGTAGAGGAAG
ATAAACTAAACCCTAGGCTCTCTGGAATTGATGAAGAATTGAGAACTTTTGGCATGATAGTTTTGGAAAGTCCGTATGGT
AAGTCAAAATCCCTAAAATTAATCGCTCAGAAAATTAGAGAGTTTAGAAGAAGGAGTGCGTAG

Upstream 100 bases:

>100_bases
TCATTTCATCTAATAGTATCTTTCCCAAAACTCGCAAGTTCATTTTATCCCCTCCAAATCGTTTTTAAAGTTATAGCTTT
TAAATGTTGAGGGGTAATAA

Downstream 100 bases:

>100_bases
TTACTCTTCTTCCTCCATCTCAACAACTATCGCAGTTGTTGTGTCTATAACTCCATCTATGTTATGAATGTCATGAAGGA
TTTTTCTTGTTAGTTCTCCT

Product: signal recognition particle protein Srp19

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPRLSGIDEELRTFGMIVLESPYG
KSKSLKLIAQKIREFRRRSA

Sequences:

>Translated_100_residues
MGRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPRLSGIDEELRTFGMIVLESPYG
KSKSLKLIAQKIREFRRRSA
>Mature_99_residues
GRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPRLSGIDEELRTFGMIVLESPYGK
SKSLKLIAQKIREFRRRSA

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_PYRFU (Q8TZT9)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579623.1
- PDB:   3DLU
- PDB:   3DLV
- PDBsum:   3DLU
- PDBsum:   3DLV
- ProteinModelPortal:   Q8TZT9
- SMR:   Q8TZT9
- EnsemblBacteria:   EBPYRT00000004967
- GeneID:   1469773
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1894
- NMPDR:   fig|186497.1.peg.1943
- GeneTree:   EBGT00050000022691
- HOGENOM:   HBG629394
- OMA:   FVVWPSE
- ProtClustDB:   PRK03745
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30
- PANTHER:   PTHR17453

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 11645; Mature: 11514

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPRL
CCCEEECHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCC
SGIDEELRTFGMIVLESPYGKSKSLKLIAQKIREFRRRSA
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPRL
CCEEECHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCC
SGIDEELRTFGMIVLESPYGKSKSLKLIAQKIREFRRRSA
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA