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The map label for this gene is ybhR [C]

Identifier: 18978260

GI number: 18978260

Start: 1741053

End: 1741820

Strand: Reverse

Name: ybhR [C]

Synonym: PF1888

Alternate gene names: 18978260

Gene position: 1741820-1741053 (Counterclockwise)

Preceding gene: 18978261

Following gene: 18978259

Centisome position: 91.28

GC content: 39.45

Gene sequence:

>768_bases
ATGTTCTTTAGGTATCCTTTAAGGGTAATAAGCTCAATTTTAGTTGGGTTAGTATTTCTCCTACAGTTCGTTTACTTTGG
CCAGGCTATTTTAGGAGGTAGATTCTCTAGACTATTAGAGGAAGCTACAGGAGTTGGGGATTATCCAACTTATGTTCTTA
TTGGATATGTTCTTTGGTGGGTCTCAGTTTCTCCTATGGAAGCCTCCGTATGGGGAGTTAGAAGAGAGCTTCAGAGGGGA
ACCTTCGAAAGCAATGTCATGGCTCCAATTGGAATTTTAAAAATGATAATGGGTCTTGCAATTTCTTGGATGATGATGGA
TTCTATTATAATGCTCCTGGTATTTGCCCTTGGCGTCGTAATTTTTGATATAAAAGTCTCTGCAATCTATGTTGCAAAAG
CTATCCCAATAATAGCGCTTGCCTTCGTAACTTTCCTCGGATTTGGAATAGTTTTTGCTGGCTTAGTTATGATGCTCAAA
AATATTGGCCCCCTAGCTAATATCTTTGAATTTGTTATTCTCTTCCTTTCTGGAGTTTTCTTTCCCCTATCCACGTTACC
TGAAATTGTGAGGAAGATTTCTTGGATTATTCCCCTAACTCACGCAACTAGTGCCGTTAGGAAGATTTTTATTGGATTGA
GCTATTCATCTGTAGTTAATGAAATAACAGCCATGCTCATTCTCCTTCCTGTTTATTGGGCGATAAGCTTGGCAGTGTTC
AAGTGGGCAGAAAAAGTAACGAGGATGATGGGATATGGGGGTTACTGA

Upstream 100 bases:

>100_bases
TTGAAGTGGAGGAGCCCACTCTAGAAGATGTCTTCATAAAGCTCACTGGTAGGGGGCTTAGAGATTGAGCCTCTTGGCCA
TAATTGACAAAGAATTCAGG

Downstream 100 bases:

>100_bases
AGAACTTGAGGCTCTAAAAGGTGTTGCGAGAAAAAATTGGAAAATATTTTTGAGTTATAAGGCGTGGTTTGTTAGCGATA
TCTTAATGGGATTCTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease; Multidrug ABC Transporter Permease; ABC-2 Type Transporter; ABC Transporter Permease Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFFRYPLRVISSILVGLVFLLQFVYFGQAILGGRFSRLLEEATGVGDYPTYVLIGYVLWWVSVSPMEASVWGVRRELQRG
TFESNVMAPIGILKMIMGLAISWMMMDSIIMLLVFALGVVIFDIKVSAIYVAKAIPIIALAFVTFLGFGIVFAGLVMMLK
NIGPLANIFEFVILFLSGVFFPLSTLPEIVRKISWIIPLTHATSAVRKIFIGLSYSSVVNEITAMLILLPVYWAISLAVF
KWAEKVTRMMGYGGY

Sequences:

>Translated_255_residues
MFFRYPLRVISSILVGLVFLLQFVYFGQAILGGRFSRLLEEATGVGDYPTYVLIGYVLWWVSVSPMEASVWGVRRELQRG
TFESNVMAPIGILKMIMGLAISWMMMDSIIMLLVFALGVVIFDIKVSAIYVAKAIPIIALAFVTFLGFGIVFAGLVMMLK
NIGPLANIFEFVILFLSGVFFPLSTLPEIVRKISWIIPLTHATSAVRKIFIGLSYSSVVNEITAMLILLPVYWAISLAVF
KWAEKVTRMMGYGGY
>Mature_255_residues
MFFRYPLRVISSILVGLVFLLQFVYFGQAILGGRFSRLLEEATGVGDYPTYVLIGYVLWWVSVSPMEASVWGVRRELQRG
TFESNVMAPIGILKMIMGLAISWMMMDSIIMLLVFALGVVIFDIKVSAIYVAKAIPIIALAFVTFLGFGIVFAGLVMMLK
NIGPLANIFEFVILFLSGVFFPLSTLPEIVRKISWIIPLTHATSAVRKIFIGLSYSSVVNEITAMLILLPVYWAISLAVF
KWAEKVTRMMGYGGY

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28468; Mature: 28468

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRYPLRVISSILVGLVFLLQFVYFGQAILGGRFSRLLEEATGVGDYPTYVLIGYVLWW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VSVSPMEASVWGVRRELQRGTFESNVMAPIGILKMIMGLAISWMMMDSIIMLLVFALGVV
HHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFDIKVSAIYVAKAIPIIALAFVTFLGFGIVFAGLVMMLKNIGPLANIFEFVILFLSGVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FPLSTLPEIVRKISWIIPLTHATSAVRKIFIGLSYSSVVNEITAMLILLPVYWAISLAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWAEKVTRMMGYGGY
HHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA