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The map label for this gene is yvrC [H]

Identifier: 18978146

GI number: 18978146

Start: 1649441

End: 1650532

Strand: Direct

Name: yvrC [H]

Synonym: PF1774

Alternate gene names: 18978146

Gene position: 1649441-1650532 (Clockwise)

Preceding gene: 18978145

Following gene: 18978151

Centisome position: 86.44

GC content: 40.66

Gene sequence:

>1092_bases
ATGAAAAGAGCCATACCTGTATTTCTGCTCATAGTGCTTGTGTGGATTAGTGGATGTATAGGAGGAGGTACCTCAACAAT
TCCAACAACTCCATCAGCACCAGAAACAACAACAATAACAAAAACAGAAAAAGTAGTGGAAACAGTTACACAAACAGTAA
CGGTAACCCAAACAATGACTCCCCAGAAGTATCCAATTACAATAGTCGATTCACTTGGAAGAGAAGTTAAAATAGAAAAG
GAGCCAGAGAGGATAGTTTCTCTTGCCCCCAGCATTACCGAGACTCTGTACTTTATAGGAGCACTTGATAAGGTGGTGGG
AGTTACAAAGTTCGACGATTTCCCACCAGATGTAAAGGAAGGAAGGACAATAATTGGAGGATTTTCTGATCCAAACATAG
AGGTAATTGCATCCTTAAATCCTGACCTCATAATAGGAACTAGTATGCACATGCAGTATCTTGACAAGTTACAAGAAATC
GCTCCAGTAATAATCGTTGATCCAAAGAACATTGACGAAATCTACGAGTGGATAATCAAGTTAGGAAAAGTTGTTAACAG
GGAGGAGGAAGCTGTCGGAGTTGTAAACTATATGAAGGCTATAGTGGAGGATGTAGAGAGTAAGGTCTCAAATGCCTCCA
GGCCAAAAGTCTTCTACCTTTTAGGTTACTGGGATGGATACTGGACGACAGGAAAAGGAACATTCATAGATAGCTTAATA
ACAATGGCTGGGGGAGAAAACATCTTTAGCGATATCGAGGGATGGAAGAAAGTCAGCGCAGAAGACATAGTGGCGAGAAA
CCCTGAAGTGATCATAATTTCATACCACGCAGGCGTTAATCCAGGAGATCTATGCAACACACCTCTAGCAAATACAGACG
CTGTGAAGAATGGGAGAGTTTATGTAATTAGTGATGACAACATAATATCCAGACCTGGGCCAAGAATTGTTCTAGCACTT
CAAGAGATAGCATATTTCATTCATCCCGAAGCATTTAACTACGCTTACCAACCCAAGGCTTGTGCCCGTTGCTTCTTCAT
GACTTTTTCTTTATTTTTTAATGAAGACTTATTGTGGGTAGAGTGGTTATAG

Upstream 100 bases:

>100_bases
TTCGAGCTTTCTGAGAAGTAGTTTCTTCTTGGATTTTTTATCCAAAACTTTTTAAACTATTCTCTTTACTGTTGGATGAT
TAATCCAAGGAGGGAATCAC

Downstream 100 bases:

>100_bases
CTAAGCTTAAGAGACCACCAATTAAGAGTGCGGGAATTGTAGATTTTTTATCTATTCCCAGGACATAGGCAGCTAATGAA
CCAGTCCAAATGCCTGTCCC

Product: iron III ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKRAIPVFLLIVLVWISGCIGGGTSTIPTTPSAPETTTITKTEKVVETVTQTVTVTQTMTPQKYPITIVDSLGREVKIEK
EPERIVSLAPSITETLYFIGALDKVVGVTKFDDFPPDVKEGRTIIGGFSDPNIEVIASLNPDLIIGTSMHMQYLDKLQEI
APVIIVDPKNIDEIYEWIIKLGKVVNREEEAVGVVNYMKAIVEDVESKVSNASRPKVFYLLGYWDGYWTTGKGTFIDSLI
TMAGGENIFSDIEGWKKVSAEDIVARNPEVIIISYHAGVNPGDLCNTPLANTDAVKNGRVYVISDDNIISRPGPRIVLAL
QEIAYFIHPEAFNYAYQPKACARCFFMTFSLFFNEDLLWVEWL

Sequences:

>Translated_363_residues
MKRAIPVFLLIVLVWISGCIGGGTSTIPTTPSAPETTTITKTEKVVETVTQTVTVTQTMTPQKYPITIVDSLGREVKIEK
EPERIVSLAPSITETLYFIGALDKVVGVTKFDDFPPDVKEGRTIIGGFSDPNIEVIASLNPDLIIGTSMHMQYLDKLQEI
APVIIVDPKNIDEIYEWIIKLGKVVNREEEAVGVVNYMKAIVEDVESKVSNASRPKVFYLLGYWDGYWTTGKGTFIDSLI
TMAGGENIFSDIEGWKKVSAEDIVARNPEVIIISYHAGVNPGDLCNTPLANTDAVKNGRVYVISDDNIISRPGPRIVLAL
QEIAYFIHPEAFNYAYQPKACARCFFMTFSLFFNEDLLWVEWL
>Mature_363_residues
MKRAIPVFLLIVLVWISGCIGGGTSTIPTTPSAPETTTITKTEKVVETVTQTVTVTQTMTPQKYPITIVDSLGREVKIEK
EPERIVSLAPSITETLYFIGALDKVVGVTKFDDFPPDVKEGRTIIGGFSDPNIEVIASLNPDLIIGTSMHMQYLDKLQEI
APVIIVDPKNIDEIYEWIIKLGKVVNREEEAVGVVNYMKAIVEDVESKVSNASRPKVFYLLGYWDGYWTTGKGTFIDSLI
TMAGGENIFSDIEGWKKVSAEDIVARNPEVIIISYHAGVNPGDLCNTPLANTDAVKNGRVYVISDDNIISRPGPRIVLAL
QEIAYFIHPEAFNYAYQPKACARCFFMTFSLFFNEDLLWVEWL

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=245, Percent_Identity=26.1224489795918, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 40353; Mature: 40353

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAIPVFLLIVLVWISGCIGGGTSTIPTTPSAPETTTITKTEKVVETVTQTVTVTQTMT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEEEEECC
PQKYPITIVDSLGREVKIEKEPERIVSLAPSITETLYFIGALDKVVGVTKFDDFPPDVKE
CCCCCEEEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
GRTIIGGFSDPNIEVIASLNPDLIIGTSMHMQYLDKLQEIAPVIIVDPKNIDEIYEWIIK
CCEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LGKVVNREEEAVGVVNYMKAIVEDVESKVSNASRPKVFYLLGYWDGYWTTGKGTFIDSLI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHH
TMAGGENIFSDIEGWKKVSAEDIVARNPEVIIISYHAGVNPGDLCNTPLANTDAVKNGRV
HHCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCEE
YVISDDNIISRPGPRIVLALQEIAYFIHPEAFNYAYQPKACARCFFMTFSLFFNEDLLWV
EEEECCCEECCCCCEEEEEHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
EWL
EEC
>Mature Secondary Structure
MKRAIPVFLLIVLVWISGCIGGGTSTIPTTPSAPETTTITKTEKVVETVTQTVTVTQTMT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEEEEECC
PQKYPITIVDSLGREVKIEKEPERIVSLAPSITETLYFIGALDKVVGVTKFDDFPPDVKE
CCCCCEEEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
GRTIIGGFSDPNIEVIASLNPDLIIGTSMHMQYLDKLQEIAPVIIVDPKNIDEIYEWIIK
CCEEEECCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LGKVVNREEEAVGVVNYMKAIVEDVESKVSNASRPKVFYLLGYWDGYWTTGKGTFIDSLI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHH
TMAGGENIFSDIEGWKKVSAEDIVARNPEVIIISYHAGVNPGDLCNTPLANTDAVKNGRV
HHCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCEE
YVISDDNIISRPGPRIVLALQEIAYFIHPEAFNYAYQPKACARCFFMTFSLFFNEDLLWV
EEEECCCEECCCCCEEEEEHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
EWL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]