Click here to switch to the map view.

The map label for this gene is korB [H]

Identifier: 18978144

GI number: 18978144

Start: 1647977

End: 1648822

Strand: Direct

Name: korB [H]

Synonym: PF1772

Alternate gene names: 18978144

Gene position: 1647977-1648822 (Clockwise)

Preceding gene: 18978143

Following gene: 18978145

Centisome position: 86.36

GC content: 43.14

Gene sequence:

>846_bases
ATGAAACTTGTTTCTGCTTATGAAATTAGAGACAAATACCTAAGAAAAGACATGCTCCCCACAATCTTTTGCCCAGGCTG
TGGAATTGGTTCAGTTCTACAATTTACACTTAGGGCAATTGATGACCTGGGACTTGATCCAGATAAAATAGTTTGGGTAA
GTGGGATAGGATGTTCTTCGAGAGTTCCTGGATTCGTGAACTTTGATGGCCTCCACACTACCCACGGTAGAGCGTTGGCC
TTTGCTACTGGAATTAAGCTAGCGAACCCAGAGCTAAAGATAATAGCTTTTATGGGAGACGGGGATGCGGCTGCTATAGG
AGGAAATCACTTAATTCATGCAATTAGAAGGAACCTAGATGTGACTGTTATACTAATCAACAACTTCACCTACGGGATGA
CTGGAGGACAAGTCGCACCAACAACTCCAAAGGGACTTAGGGGAACTACAGCCCCCTATGGACAGTTTGAAAATCCATTT
GACATAGCACAACTTGCAGTCGCTGCTGGCGCAAATTACGTGGCAAGATGGACAGTTTTCAACTATATTCAAGGAATAAA
CAGCATAAAGAAAGCACTCAGCAAGGAAGGATTTACTCTCGTGGAGTTCCTCAGCCCCTGTCCAATTAGTTTCGGAAGGA
GAAACAGAATGAAGAGTGCTCCAGAAATTATTAGATGGTATCAAGAGATAACAGTTCCTATAAGCAAAGCAAAGAACATG
AAACCTGAGGAGTTGGAAGGAAAGATAGTTATTGGGGAGTTCGTCGATAGAGATAGGCCAGGGCTCGTTAGAGAATACAT
GGAGTACATTAAGAGAGCAAAGAAGATCATGGGGTGGGAAGAATGA

Upstream 100 bases:

>100_bases
AAGGAGCAAATGGAAAAGCTGAGGTTAAGCTCATTAGCAAGATTGGTGGGGAAGTTCACACTCCAATGGAAATTTTCGAG
TTCATAAGGAGGGAGTTTAA

Downstream 100 bases:

>100_bases
GGAAGGAAATTCTTTTGGGAGGATTTGGAGGCCAGGGTATAATATTGGCGAGTGTAATTCTTGGAAGGGCTGCAGCTGTC
TATGAAGGACTATATGCTGT

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALA
FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPF
DIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKSAPEIIRWYQEITVPISKAKNM
KPEELEGKIVIGEFVDRDRPGLVREYMEYIKRAKKIMGWEE

Sequences:

>Translated_281_residues
MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALA
FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPF
DIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKSAPEIIRWYQEITVPISKAKNM
KPEELEGKIVIGEFVDRDRPGLVREYMEYIKRAKKIMGWEE
>Mature_281_residues
MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDDLGLDPDKIVWVSGIGCSSRVPGFVNFDGLHTTHGRALA
FATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLDVTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPF
DIAQLAVAAGANYVARWTVFNYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKSAPEIIRWYQEITVPISKAKNM
KPEELEGKIVIGEFVDRDRPGLVREYMEYIKRAKKIMGWEE

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 31117; Mature: 31117

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDDLGLDPDKIVWVSGIGCSS
CCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD
CCCCCEECCCCCCCCCCEEEEEECCEECCCCEEEEEEECCCCEEEECHHHHHHHHHHCCC
VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF
EEEEEEECEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKSAPEIIRWYQEITVPISKAKNM
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHCCC
KPEELEGKIVIGEFVDRDRPGLVREYMEYIKRAKKIMGWEE
CHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLVSAYEIRDKYLRKDMLPTIFCPGCGIGSVLQFTLRAIDDLGLDPDKIVWVSGIGCSS
CCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
RVPGFVNFDGLHTTHGRALAFATGIKLANPELKIIAFMGDGDAAAIGGNHLIHAIRRNLD
CCCCCEECCCCCCCCCCEEEEEECCEECCCCEEEEEEECCCCEEEECHHHHHHHHHHCCC
VTVILINNFTYGMTGGQVAPTTPKGLRGTTAPYGQFENPFDIAQLAVAAGANYVARWTVF
EEEEEEECEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
NYIQGINSIKKALSKEGFTLVEFLSPCPISFGRRNRMKSAPEIIRWYQEITVPISKAKNM
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHCCC
KPEELEGKIVIGEFVDRDRPGLVREYMEYIKRAKKIMGWEE
CHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]