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The map label for this gene is ydaO [C]

Identifier: 18978130

GI number: 18978130

Start: 1634603

End: 1635562

Strand: Reverse

Name: ydaO [C]

Synonym: PF1758

Alternate gene names: 18978130

Gene position: 1635562-1634603 (Counterclockwise)

Preceding gene: 18978135

Following gene: 33359573

Centisome position: 85.71

GC content: 40.83

Gene sequence:

>960_bases
ATGAAGTGTTCAAAGTGTGGAAGAGAGGCCATATATTTTGCCCGATACGAGGGTAGATACTACTGCCACAAGCACTTCAA
TGAGCTAGTGGAGGGAAAGGTAAAGAGAACTATAAGAAAGTACAGGATGATAAAAAGAGGGGAAAAAGTTGGAGTTGCGG
TGAGCGGAGGAAAGGACAGCGTAGTTCTTATGCACATTTTGGCAAAGCTAAGGAAAAAGTTTCCCTTTGAGCTGGTTGCA
ATAACAATTGATGAGGGGATTAAAGGGTATAGAGATAAAAGTGTTGAAGTTGCTCGAAAAAATGCAGAACTTTTAGGAGT
GGAGCATCACATTTACAGGTTTAAGGATTTTATTGGCTTCACATTAGATGAAACTGTGGAAATTATGGGGCCTAGAGAAG
AGAGAGTGGGCGCCTGTTCTTATTGTGGAGTATGGAGACGATGGTTGCTCAACAAGGCAGCTGAGGAATTGGGAGTTGAT
AAGCTTGCCTTAGGACTTAACTTGGACGATGAAGTTCAAGTATTTTTAATGAATTTGATGAGGGGAGATGTGGCAAGATT
AGGAAGAACTGGTCCTTACTATGAGGTAATTCATGAAGGGTTAGTTCCTAGAATAAAACCTCTCAGGGAGGTTCCCGAGA
AAGAAATCGTTCTCTATGCAGTTTTAAACAACATTGAAGTGGATTTAAGTGAGTGTCCTTATGCAACTGAAGCATTTAGG
GCTGAAATTAGAGATTGGCTCAATGAAATGGAGGAGAAGCATCCTGGGACTAAATATCAGCTGTTGAGGAGCTACGACAA
AATATTCCCCCTCTTAGCAAAAACATATGCCAAGGAAGTAAAACTAAATCGCTGTAAGATTTGTGGCCAGCCCACAAGTG
GAGAAATATGTAAAGCTTGCCAGTTCAGGCTTCAAGTAAAAGAGAAATCAGAGAACCTAAAATTCAGCCTTACCAAATGA

Upstream 100 bases:

>100_bases
TAAGGGATGATGAAGGAGATTTCGGCAGAGGTGTGAAGAGACTCGCATGGGCTGACCACCACCTTTAAAAATTTTTGCTC
TCCTTTACTTTCGAGTTAAA

Downstream 100 bases:

>100_bases
CTTCTTCTTTTTCTTCCTTTACTTGAGATATTTTTGGAAGTGAAGCTATTAAGACAATAACTGTTATTACGGCTAGAACT
ATTTCCGTCAGAAGAAGAAT

Product: n-type ATP pyrophosphatase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKCSKCGREAIYFARYEGRYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDSVVLMHILAKLRKKFPFELVA
ITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVD
KLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFR
AEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKACQFRLQVKEKSENLKFSLTK

Sequences:

>Translated_319_residues
MKCSKCGREAIYFARYEGRYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDSVVLMHILAKLRKKFPFELVA
ITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVD
KLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFR
AEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKACQFRLQVKEKSENLKFSLTK
>Mature_319_residues
MKCSKCGREAIYFARYEGRYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDSVVLMHILAKLRKKFPFELVA
ITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVD
KLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFR
AEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKACQFRLQVKEKSENLKFSLTK

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=303, Percent_Identity=32.3432343234323, Blast_Score=158, Evalue=5e-39,
Organism=Escherichia coli, GI1787606, Length=241, Percent_Identity=27.8008298755187, Blast_Score=81, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17540090, Length=302, Percent_Identity=37.0860927152318, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI193211090, Length=256, Percent_Identity=29.296875, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321227, Length=135, Percent_Identity=40.7407407407407, Blast_Score=108, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24651972, Length=299, Percent_Identity=37.4581939799331, Blast_Score=192, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 36882; Mature: 36882

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCSKCGREAIYFARYEGRYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDS
CCCCHHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
VVLMHILAKLRKKFPFELVAITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIGF
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCC
TLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVDKLALGLNLDDEVQVFLMNLM
CHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHH
RGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFR
HHHHHHHCCCCCHHHHHHCCCCCCHHHHHHCCHHHEEEEEECCCCEECHHHCCCHHHHHH
AEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKAC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHH
QFRLQVKEKSENLKFSLTK
HHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MKCSKCGREAIYFARYEGRYYCHKHFNELVEGKVKRTIRKYRMIKRGEKVGVAVSGGKDS
CCCCHHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
VVLMHILAKLRKKFPFELVAITIDEGIKGYRDKSVEVARKNAELLGVEHHIYRFKDFIGF
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCC
TLDETVEIMGPREERVGACSYCGVWRRWLLNKAAEELGVDKLALGLNLDDEVQVFLMNLM
CHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHH
RGDVARLGRTGPYYEVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFR
HHHHHHHCCCCCHHHHHHCCCCCCHHHHHHCCHHHEEEEEECCCCEECHHHCCCHHHHHH
AEIRDWLNEMEEKHPGTKYQLLRSYDKIFPLLAKTYAKEVKLNRCKICGQPTSGEICKAC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHH
QFRLQVKEKSENLKFSLTK
HHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]