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The map label for this gene is ynbD [C]

Identifier: 18978046

GI number: 18978046

Start: 1558032

End: 1558520

Strand: Reverse

Name: ynbD [C]

Synonym: PF1674

Alternate gene names: 18978046

Gene position: 1558520-1558032 (Counterclockwise)

Preceding gene: 18978048

Following gene: 18978045

Centisome position: 81.67

GC content: 37.63

Gene sequence:

>489_bases
ATGCTTAAGAACGTTTTTGTGAAAAAACTCTCAGGTGATATAATGGAGGTTCGCTTTGTTGACGATTATGTGGCGTTTTC
TAGAATGCCATATGAAGATGAGATTGGGGAGTTAGTTAAGGAGTTTGATGCTTTCGTTGTGTTGGTTGAAGAATTTGAGT
TGGAATATGATCTAGAAAAAGTTAAAAGGGAAGTTGAGGTTTTACACGTTCCAATACCTGATTTTACAGCACCTAGCATT
GAAGAATTAAAATACATCGTGAAGTGGATTGATGAAAAGGTGAAAGAAGGAAAGAAAGTTCTAGTACATTGCTATGGAGG
GAGTGGAAGAAGTGGAACTGTGGTTGTGGCTTGGTTAATGTATAAGTATAAGCTCCCTTTAAAAGAAGCACTTTTGGAAG
TTAGGACCTTGAAGCCAAGTGCTGTAGAAACTAGGGATCAGCTAGAGGTTCTTAAAGAATTCGAAAAGCTTCTAGGAACT
ATTGTCTGA

Upstream 100 bases:

>100_bases
TTCAATGTATTTTCTGTAGTAATAGCACGTAGATTCGGGAGTCATTCCTCCAATTAGTCCTATTTTCTTCACTACTCTCA
CCGAAATAGGGGGAATCTAA

Downstream 100 bases:

>100_bases
GGTAAACCGTAAAGTTTTTAAAGTGTTTGTGGGGAGTTGGTAGTGGTACGGCGGCCATAGCGGGGGGCCACACCCGGTCT
CATTTCGAACCCGGAAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein-Tyrosine Phosphatase; Protein Tyrosine/Serine/Threonine Phosphatase; Protein Tyrosine Phosphatase; Tyrosine Specific Protein Phosphatase

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLKNVFVKKLSGDIMEVRFVDDYVAFSRMPYEDEIGELVKEFDAFVVLVEEFELEYDLEKVKREVEVLHVPIPDFTAPSI
EELKYIVKWIDEKVKEGKKVLVHCYGGSGRSGTVVVAWLMYKYKLPLKEALLEVRTLKPSAVETRDQLEVLKEFEKLLGT
IV

Sequences:

>Translated_162_residues
MLKNVFVKKLSGDIMEVRFVDDYVAFSRMPYEDEIGELVKEFDAFVVLVEEFELEYDLEKVKREVEVLHVPIPDFTAPSI
EELKYIVKWIDEKVKEGKKVLVHCYGGSGRSGTVVVAWLMYKYKLPLKEALLEVRTLKPSAVETRDQLEVLKEFEKLLGT
IV
>Mature_162_residues
MLKNVFVKKLSGDIMEVRFVDDYVAFSRMPYEDEIGELVKEFDAFVVLVEEFELEYDLEKVKREVEVLHVPIPDFTAPSI
EELKYIVKWIDEKVKEGKKVLVHCYGGSGRSGTVVVAWLMYKYKLPLKEALLEVRTLKPSAVETRDQLEVLKEFEKLLGT
IV

Specific function: Unknown

COG id: COG2453

COG function: function code T; Predicted protein-tyrosine phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17542340, Length=106, Percent_Identity=35.8490566037736, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18790; Mature: 18790

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2 ; PS50054 TYR_PHOSPHATASE_DUAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNVFVKKLSGDIMEVRFVDDYVAFSRMPYEDEIGELVKEFDAFVVLVEEFELEYDLEK
CCCHHHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VKREVEVLHVPIPDFTAPSIEELKYIVKWIDEKVKEGKKVLVHCYGGSGRSGTVVVAWLM
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
YKYKLPLKEALLEVRTLKPSAVETRDQLEVLKEFEKLLGTIV
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNVFVKKLSGDIMEVRFVDDYVAFSRMPYEDEIGELVKEFDAFVVLVEEFELEYDLEK
CCCHHHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VKREVEVLHVPIPDFTAPSIEELKYIVKWIDEKVKEGKKVLVHCYGGSGRSGTVVVAWLM
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
YKYKLPLKEALLEVRTLKPSAVETRDQLEVLKEFEKLLGTIV
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA