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The map label for this gene is nudF [H]

Identifier: 18977962

GI number: 18977962

Start: 1484516

End: 1485025

Strand: Direct

Name: nudF [H]

Synonym: PF1590

Alternate gene names: 18977962

Gene position: 1484516-1485025 (Clockwise)

Preceding gene: 18977961

Following gene: 18977963

Centisome position: 77.79

GC content: 40.0

Gene sequence:

>510_bases
ATGGATAGGTATGTGCTCCTTGTGAAGGCTCCAAAGGAATATGATATTTCAAAATTTAGAGAGGAAGTTGAAAAAATAGC
AAAAGATTATGGGCTTAAAGTAGAGGCACACAAGTGCATTGGAGTTACAGTAGACATAGTGATTATTCACAATGGCAACA
TTGTCCTCATAGAGAGGAAAAACGACCCATACAAGGGATATTTGGCACTCCCAGGAGGCTTTGTTGAGTATGGGGAGAAG
GTGGAAGAAGCAGCAATAAGAGAAGCAAAAGAAGAAACTGGATTAGATGTTAAGTTGTTGAGAGTTGTAGGAGTTTATTC
AGATCCCAATCGAGATCCCAGGGGTCATACAATAACGGTTGCGTTTTTGGCCATTGGCCTGGGAGAACCAAAGGCTGGAG
ATGATGCAAAGAAAGTTCACCTAATCCCAATTGAAGAAATTGAAAAAATAAAAGCAAAGCTGGCTTTTGACCACGCTAAG
ATTATAGAAGATGCCTTAACGCTAAGATAA

Upstream 100 bases:

>100_bases
TTTTTGAAGTTAGGACTAGAGAAGTATTTAGAGGAGCAATGATGAAGCCTCGATTGGCTGATTTGATGATTGGGAGGGAC
TTGGCTGAGCGGTGATTAAA

Downstream 100 bases:

>100_bases
ACATAAAAATGGACAGAGATAATTTATTTCGGTGAAATATCATGAAGGCCTTCATATCTATAGATTTAGAGGGGCTTCCC
TACATCGTTAGTAGGGAGCA

Product: mutt putative

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDRYVLLVKAPKEYDISKFREEVEKIAKDYGLKVEAHKCIGVTVDIVIIHNGNIVLIERKNDPYKGYLALPGGFVEYGEK
VEEAAIREAKEETGLDVKLLRVVGVYSDPNRDPRGHTITVAFLAIGLGEPKAGDDAKKVHLIPIEEIEKIKAKLAFDHAK
IIEDALTLR

Sequences:

>Translated_169_residues
MDRYVLLVKAPKEYDISKFREEVEKIAKDYGLKVEAHKCIGVTVDIVIIHNGNIVLIERKNDPYKGYLALPGGFVEYGEK
VEEAAIREAKEETGLDVKLLRVVGVYSDPNRDPRGHTITVAFLAIGLGEPKAGDDAKKVHLIPIEEIEKIKAKLAFDHAK
IIEDALTLR
>Mature_169_residues
MDRYVLLVKAPKEYDISKFREEVEKIAKDYGLKVEAHKCIGVTVDIVIIHNGNIVLIERKNDPYKGYLALPGGFVEYGEK
VEEAAIREAKEETGLDVKLLRVVGVYSDPNRDPRGHTITVAFLAIGLGEPKAGDDAKKVHLIPIEEIEKIKAKLAFDHAK
IIEDALTLR

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 18890; Mature: 18890

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYVLLVKAPKEYDISKFREEVEKIAKDYGLKVEAHKCIGVTVDIVIIHNGNIVLIERK
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEECCCEEEEECC
NDPYKGYLALPGGFVEYGEKVEEAAIREAKEETGLDVKLLRVVGVYSDPNRDPRGHTITV
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEE
AFLAIGLGEPKAGDDAKKVHLIPIEEIEKIKAKLAFDHAKIIEDALTLR
EEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRYVLLVKAPKEYDISKFREEVEKIAKDYGLKVEAHKCIGVTVDIVIIHNGNIVLIERK
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEEEECCCEEEEECC
NDPYKGYLALPGGFVEYGEKVEEAAIREAKEETGLDVKLLRVVGVYSDPNRDPRGHTITV
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEE
AFLAIGLGEPKAGDDAKKVHLIPIEEIEKIKAKLAFDHAKIIEDALTLR
EEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]