Click here to switch to the map view.

The map label for this gene is sppA [H]

Identifier: 18977955

GI number: 18977955

Start: 1478690

End: 1479679

Strand: Direct

Name: sppA [H]

Synonym: PF1583

Alternate gene names: 18977955

Gene position: 1478690-1479679 (Clockwise)

Preceding gene: 18977946

Following gene: 33359568

Centisome position: 77.49

GC content: 37.27

Gene sequence:

>990_bases
ATGCCAGAGGGTGTGTGGAAATACATATCGTTTATCTTAGCTCTAGTCTTAAGTTTTTCAATAGCAGCAAATGCGCTTTT
GTATCTTCAAGTTGGGGAGCTCCAGTCAACTACATATAAACTACAAAAAATTCTGCCATCCCAGACAAATATAACAACAA
ACTATACAACTCTGCAGCTAAAAATAGAGGAATTAAAGAAAGAAATTGAATATCTAAGAGCGTATATTCAAAAACAAAAT
GAAACAGCTAACGGAAGTTTAGCAATAGTCCCAATATTTGGATTAATAGACGAAAACATGGCGCTGGAGGTAGTTAAGAA
ACTTGAGGTTATAAAGTCAGATCCATCAATAAGGGGAGTTCTTCTCTGGATTGATAGCCCAGGAGGATATATAGGACCAG
TCAGAGCTATATACAAGGAGGTAAAGGAACTCGCTTACATAAAACCAATTGTTGCATACATTAGTGGCTACGCAACATCT
GGGGGCTACTATATAGCATGTGGAGCCGATAAAATAATCGCTGATCCCTATGCCCAGGTCGGGAGCATTGGAGTAATTTA
CGTTCATTTTAATGCTCAAAAATACTATGAGATGAATGGAATAGAAGTAGAAGTCTTTAAAACCGGGCCATATAAGGATA
TGGGAGCCGATTGGAGAGGATTAAAACCTGAAGAGAGAGAAATTATACAAAAGCAAATAGATGTTTACTTTAAGACGTTT
CTAGATGTAGTCATGGAAGGAAGAAACCTCAACGAAACTAAAGTTAAAGAGTATGCAGATGGGAGAGCTTGGTTTGCATA
TGAAGTCAATGGAACCCTCATTGATGACATAGGAGATTTGCAGTACGCGATAGAAGAGACAAAAAAATTAGCAAACCTTA
AATCTGCAAACATAGTAATATTTGACGTAAAACCATCAAACTTTGAAATTAGGGGAAGTTCAGCACTGTATCTCCCCCAA
GAATACGTTTACAAGTACATTAGAAGGTGA

Upstream 100 bases:

>100_bases
GAGTGTTTAAAAATTTTTGCATAGGACACACAATTACATGACCAACACCTTGCAAACTTATAAACTTTGATTTTGTTAGA
GTGGATTAGGGGAAAAGAAG

Downstream 100 bases:

>100_bases
GTAGTATGTTGTGCGAAGAGAAGCTAGAAGTCTTTGAGAATGGATTTAAAGACGACAAGCACAACATAGAGATTCATGTG
TATGGAGGAGATGGCAGAAA

Product: protease IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPEGVWKYISFILALVLSFSIAANALLYLQVGELQSTTYKLQKILPSQTNITTNYTTLQLKIEELKKEIEYLRAYIQKQN
ETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGVLLWIDSPGGYIGPVRAIYKEVKELAYIKPIVAYISGYATS
GGYYIACGADKIIADPYAQVGSIGVIYVHFNAQKYYEMNGIEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTF
LDVVMEGRNLNETKVKEYADGRAWFAYEVNGTLIDDIGDLQYAIEETKKLANLKSANIVIFDVKPSNFEIRGSSALYLPQ
EYVYKYIRR

Sequences:

>Translated_329_residues
MPEGVWKYISFILALVLSFSIAANALLYLQVGELQSTTYKLQKILPSQTNITTNYTTLQLKIEELKKEIEYLRAYIQKQN
ETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGVLLWIDSPGGYIGPVRAIYKEVKELAYIKPIVAYISGYATS
GGYYIACGADKIIADPYAQVGSIGVIYVHFNAQKYYEMNGIEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTF
LDVVMEGRNLNETKVKEYADGRAWFAYEVNGTLIDDIGDLQYAIEETKKLANLKSANIVIFDVKPSNFEIRGSSALYLPQ
EYVYKYIRR
>Mature_328_residues
PEGVWKYISFILALVLSFSIAANALLYLQVGELQSTTYKLQKILPSQTNITTNYTTLQLKIEELKKEIEYLRAYIQKQNE
TANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGVLLWIDSPGGYIGPVRAIYKEVKELAYIKPIVAYISGYATSG
GYYIACGADKIIADPYAQVGSIGVIYVHFNAQKYYEMNGIEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTFL
DVVMEGRNLNETKVKEYADGRAWFAYEVNGTLIDDIGDLQYAIEETKKLANLKSANIVIFDVKPSNFEIRGSSALYLPQE
YVYKYIRR

Specific function: Digestion of the cleaved signal peptides [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

Organism=Escherichia coli, GI1788064, Length=217, Percent_Identity=28.110599078341, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787527, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004635
- InterPro:   IPR002142 [H]

Pfam domain/function: PF01343 Peptidase_S49 [H]

EC number: 3.4.21.-

Molecular weight: Translated: 37313; Mature: 37181

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGVWKYISFILALVLSFSIAANALLYLQVGELQSTTYKLQKILPSQTNITTNYTTLQL
CCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCEEECEEEEEE
KIEELKKEIEYLRAYIQKQNETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGV
EHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCEEE
LLWIDSPGGYIGPVRAIYKEVKELAYIKPIVAYISGYATSGGYYIACGADKIIADPYAQV
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEECCCCHHCCCCHHH
GSIGVIYVHFNAQKYYEMNGIEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTF
CCEEEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LDVVMEGRNLNETKVKEYADGRAWFAYEVNGTLIDDIGDLQYAIEETKKLANLKSANIVI
HHHHHCCCCCCHHHHHHHCCCCEEEEEEECCEEECCHHHHHHHHHHHHHHHCCCCCCEEE
FDVKPSNFEIRGSSALYLPQEYVYKYIRR
EEECCCCEEEECCCEEECCHHHHHHHHCC
>Mature Secondary Structure 
PEGVWKYISFILALVLSFSIAANALLYLQVGELQSTTYKLQKILPSQTNITTNYTTLQL
CCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCEEECEEEEEE
KIEELKKEIEYLRAYIQKQNETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGV
EHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCEEE
LLWIDSPGGYIGPVRAIYKEVKELAYIKPIVAYISGYATSGGYYIACGADKIIADPYAQV
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEECCCCHHCCCCHHH
GSIGVIYVHFNAQKYYEMNGIEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTF
CCEEEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LDVVMEGRNLNETKVKEYADGRAWFAYEVNGTLIDDIGDLQYAIEETKKLANLKSANIVI
HHHHHCCCCCCHHHHHHHCCCCEEEEEEECCEEECCHHHHHHHHHHHHHHHCCCCCCEEE
FDVKPSNFEIRGSSALYLPQEYVYKYIRR
EEECCCCEEEECCCEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]