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The map label for this gene is 18977929

Identifier: 18977929

GI number: 18977929

Start: 1452941

End: 1453774

Strand: Reverse

Name: 18977929

Synonym: PF1557

Alternate gene names: NA

Gene position: 1453774-1452941 (Counterclockwise)

Preceding gene: 18977930

Following gene: 18977928

Centisome position: 76.18

GC content: 37.41

Gene sequence:

>834_bases
ATGAAGATACTCTATCCAACAGATTTTTCTGAAGTTTCTCAAAAGGCATTAACCGAATGTGTTCCGAGCATTATTTTAGG
AATTGGAGAGGGTAGTGAGTTAATATTGCTTCATGTAGTTGACATAACGGCCTCAGAGATCGGAGCTCTTGAATTAGCTG
AAGTAGATAAAGAAGAGTTGAACAATTTGGCTAGTCAGCTTAGAGAGAAGGGTATTAAGGTAAAACCAATCGTGAGAATT
GGTATTCCCTCTTTAGAAATTTCAGAAGTGGCAAAGGAGGAAAACGTGGATCTTATTATAATCCCCTCAAAGGGAGAGAA
CATATTAAGGCAGATGCTTTTGGGTAGTACTGCTTCAAACTTAGCGAGAATAACTCACAAACCAGTTTTACTCCTTAGAT
ATGAGGTTGAAAACGGGGAAATTAAATCTCTCCAAGACTGTTCTAGAATATTCGAGAAGCCACTAGTAGCTTTAGACCTC
TCTAAATGCTCAGAAAAAATTATTGAAACTATTAAAGATCTTCCAGGTGTTAGGGAGGCTGTTCTCTTCCACGTTGTTGA
TTATGGAAAGGTTGAGGAGTTAGAAAATAACATCAAAAACGCTAAGGAAAAGCTATCTAAATATGGCAAACTTTTACCAT
GGAAAACAAAAATAGAAGTGCAGGCTGGAATAGCCTCTAAAGGAATAATAGGTGCGGCCATAGATAATAATGTTACACTT
GTTGTTATTGGGAAGAAGGGAAGAAGTGTACTAAAGGATCTACTTCTTGGAAGCACTGCTGAAAGAGTAATTAGAGATTG
CAAATTGCCTACCCTCTTAATTCCATGTGAATGA

Upstream 100 bases:

>100_bases
GAAATCGAGAGAATTGCCGAATCTTCACGTTAGCTCTTCTCTTGTCTTTTCCACATAAAATTCTTATACCTTCTCCCCTT
AAGTATAATTGGGGATGTAA

Downstream 100 bases:

>100_bases
GAGGTGATTTTTGTGGGATTTAGATACAAACAAGTCATCGTAGCTAGGAGTGATCTTAAACTAAGTAAAGGGAAGCTGGC
AGTTCAAGTGGCTCATGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0577 [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKILYPTDFSEVSQKALTECVPSIILGIGEGSELILLHVVDITASEIGALELAEVDKEELNNLASQLREKGIKVKPIVRI
GIPSLEISEVAKEENVDLIIIPSKGENILRQMLLGSTASNLARITHKPVLLLRYEVENGEIKSLQDCSRIFEKPLVALDL
SKCSEKIIETIKDLPGVREAVLFHVVDYGKVEELENNIKNAKEKLSKYGKLLPWKTKIEVQAGIASKGIIGAAIDNNVTL
VVIGKKGRSVLKDLLLGSTAERVIRDCKLPTLLIPCE

Sequences:

>Translated_277_residues
MKILYPTDFSEVSQKALTECVPSIILGIGEGSELILLHVVDITASEIGALELAEVDKEELNNLASQLREKGIKVKPIVRI
GIPSLEISEVAKEENVDLIIIPSKGENILRQMLLGSTASNLARITHKPVLLLRYEVENGEIKSLQDCSRIFEKPLVALDL
SKCSEKIIETIKDLPGVREAVLFHVVDYGKVEELENNIKNAKEKLSKYGKLLPWKTKIEVQAGIASKGIIGAAIDNNVTL
VVIGKKGRSVLKDLLLGSTAERVIRDCKLPTLLIPCE
>Mature_277_residues
MKILYPTDFSEVSQKALTECVPSIILGIGEGSELILLHVVDITASEIGALELAEVDKEELNNLASQLREKGIKVKPIVRI
GIPSLEISEVAKEENVDLIIIPSKGENILRQMLLGSTASNLARITHKPVLLLRYEVENGEIKSLQDCSRIFEKPLVALDL
SKCSEKIIETIKDLPGVREAVLFHVVDYGKVEELENNIKNAKEKLSKYGKLLPWKTKIEVQAGIASKGIIGAAIDNNVTL
VVIGKKGRSVLKDLLLGSTAERVIRDCKLPTLLIPCE

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 30403; Mature: 30403

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILYPTDFSEVSQKALTECVPSIILGIGEGSELILLHVVDITASEIGALELAEVDKEEL
CEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEHHHHHHCCHHHHHCCHHHH
NNLASQLREKGIKVKPIVRIGIPSLEISEVAKEENVDLIIIPSKGENILRQMLLGSTASN
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHH
LARITHKPVLLLRYEVENGEIKSLQDCSRIFEKPLVALDLSKCSEKIIETIKDLPGVREA
HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHCCCHHHH
VLFHVVDYGKVEELENNIKNAKEKLSKYGKLLPWKTKIEVQAGIASKGIIGAAIDNNVTL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCEEE
VVIGKKGRSVLKDLLLGSTAERVIRDCKLPTLLIPCE
EEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKILYPTDFSEVSQKALTECVPSIILGIGEGSELILLHVVDITASEIGALELAEVDKEEL
CEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEHHHHHHCCHHHHHCCHHHH
NNLASQLREKGIKVKPIVRIGIPSLEISEVAKEENVDLIIIPSKGENILRQMLLGSTASN
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHH
LARITHKPVLLLRYEVENGEIKSLQDCSRIFEKPLVALDLSKCSEKIIETIKDLPGVREA
HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHCCCHHHH
VLFHVVDYGKVEELENNIKNAKEKLSKYGKLLPWKTKIEVQAGIASKGIIGAAIDNNVTL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCEEE
VVIGKKGRSVLKDLLLGSTAERVIRDCKLPTLLIPCE
EEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9860944 [H]