Click here to switch to the map view.

The map label for this gene is 18977866

Identifier: 18977866

GI number: 18977866

Start: 1393153

End: 1393731

Strand: Direct

Name: 18977866

Synonym: PF1494

Alternate gene names: NA

Gene position: 1393153-1393731 (Clockwise)

Preceding gene: 18977865

Following gene: 18977869

Centisome position: 73.01

GC content: 39.55

Gene sequence:

>579_bases
ATGCTAAAGGTGTTTGCTATGGAAATGAAGGATGCAAAGCTATATGGTGGTATAGGAGCAATACTCCAACTGGTAGGCCC
CTTTGTTCCCAGCATAGGGTTTATACTAGCTCTTGTTGGTTTAGTTCTAGTGTTTCTTGCGGTGAAGACAATTAGCGAAA
AGAGTGGTGATGAAGGGATATTCAACAACTATCTTAAGGCATTTATAGCTCAGATCCTTGGAATTATCATATTCGTCGGA
ATAATTGTTGCTACTATCGGCACAGCGATTCTTAAGGGAGGAATGGGCAAGCTAGCAAATCCAATGGAATTTATGAGCCT
AATTGGGACGATTCTACTTGGATTCATAATATTGTGGATCTTCTACACAGTGGCTGGATATTTCAAGAAGAAGTCCTACG
AGAATAGCCAGTACACTGGAACTGATATGTTCAAAACTGCAGGTTTGCTGTTTTTCATTGGAGCAATACTAATTATACTA
GGAATTGGTGTACTAATAATACTAATTGCAGAAATATTGGAGATTGTGGCATTCTTCTCACTACCCGAAACTTCAGAGAG
TGCTCCTGTATCTGCTTAG

Upstream 100 bases:

>100_bases
ACTATACGGGTTGATTCTCATGTACTAATGGTATTCCTGATTAATTTTATAAATTTAATTTATGCTCTTTAAGTAAAAGT
TATAAGGATAAGCTGCTAAG

Downstream 100 bases:

>100_bases
CTCCTCCTCAATTTTCTTTTTGGCATATTCATAAGCCAAGGGTCTCAACTTTTCTATAATTATTTGCCTTATCTCTTCCA
CGCCTTCTCCCTTTAAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLKVFAMEMKDAKLYGGIGAILQLVGPFVPSIGFILALVGLVLVFLAVKTISEKSGDEGIFNNYLKAFIAQILGIIIFVG
IIVATIGTAILKGGMGKLANPMEFMSLIGTILLGFIILWIFYTVAGYFKKKSYENSQYTGTDMFKTAGLLFFIGAILIIL
GIGVLIILIAEILEIVAFFSLPETSESAPVSA

Sequences:

>Translated_192_residues
MLKVFAMEMKDAKLYGGIGAILQLVGPFVPSIGFILALVGLVLVFLAVKTISEKSGDEGIFNNYLKAFIAQILGIIIFVG
IIVATIGTAILKGGMGKLANPMEFMSLIGTILLGFIILWIFYTVAGYFKKKSYENSQYTGTDMFKTAGLLFFIGAILIIL
GIGVLIILIAEILEIVAFFSLPETSESAPVSA
>Mature_192_residues
MLKVFAMEMKDAKLYGGIGAILQLVGPFVPSIGFILALVGLVLVFLAVKTISEKSGDEGIFNNYLKAFIAQILGIIIFVG
IIVATIGTAILKGGMGKLANPMEFMSLIGTILLGFIILWIFYTVAGYFKKKSYENSQYTGTDMFKTAGLLFFIGAILIIL
GIGVLIILIAEILEIVAFFSLPETSESAPVSA

Specific function: Unknown

COG id: COG2245

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010397 [H]

Pfam domain/function: PF06195 DUF996 [H]

EC number: NA

Molecular weight: Translated: 20585; Mature: 20585

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVFAMEMKDAKLYGGIGAILQLVGPFVPSIGFILALVGLVLVFLAVKTISEKSGDEGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FNNYLKAFIAQILGIIIFVGIIVATIGTAILKGGMGKLANPMEFMSLIGTILLGFIILWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH
FYTVAGYFKKKSYENSQYTGTDMFKTAGLLFFIGAILIILGIGVLIILIAEILEIVAFFS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPETSESAPVSA
CCCCCCCCCCCC
>Mature Secondary Structure
MLKVFAMEMKDAKLYGGIGAILQLVGPFVPSIGFILALVGLVLVFLAVKTISEKSGDEGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FNNYLKAFIAQILGIIIFVGIIVATIGTAILKGGMGKLANPMEFMSLIGTILLGFIILWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHH
FYTVAGYFKKKSYENSQYTGTDMFKTAGLLFFIGAILIILGIGVLIILIAEILEIVAFFS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPETSESAPVSA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]