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The map label for this gene is rps17E [H]

Identifier: 18977863

GI number: 18977863

Start: 1391951

End: 1392154

Strand: Direct

Name: rps17E [H]

Synonym: PF1491

Alternate gene names: 18977863

Gene position: 1391951-1392154 (Clockwise)

Preceding gene: 18977861

Following gene: 18977865

Centisome position: 72.94

GC content: 36.76

Gene sequence:

>204_bases
ATGGGGAAGATCAGGCAAGGTTTCATTAAGAGGGTAGCTAGAGAGCTAGTTAACAAGTATCCAAATGAATTCACAACTGA
TTTTGAGCACAACAAGAAGAAAGTTCAGGAATTAACTAACGTAACAAGCAAAAAGATAAGAAACAGGATAGCAGGTTACG
TCACAAAGCTGGTAAGAATGAAAATGGAAGGAAAGATACTTTAG

Upstream 100 bases:

>100_bases
TGTGTGAGTGTGTAAGTCCATCATCACATGCCGGATAGGGGTAAAAGTTTAAAACCGCTACGGTTAAGCGGTAACTGGAT
AAAAAGGGAGGTGAGGAAAA

Downstream 100 bases:

>100_bases
AGGGTCTTTAAGTATTCTGCGTAGGCTTTTGCATCCATTAACTCTTTAAGCTCTTCTTCTAAGTTCTTTGGCTTAATCTT
GGCTATCCAAGCTTCATAGG

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MGKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTKLVRMKMEGKIL

Sequences:

>Translated_67_residues
MGKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTKLVRMKMEGKIL
>Mature_66_residues
GKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTKLVRMKMEGKIL

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001210
- InterPro:   IPR018273 [H]

Pfam domain/function: PF00833 Ribosomal_S17e [H]

EC number: NA

Molecular weight: Translated: 7925; Mature: 7793

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTKLVRM
CCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMEGKIL
HHCCCCC
>Mature Secondary Structure 
GKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTKLVRM
CHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMEGKIL
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]