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The map label for this gene is 18977848

Identifier: 18977848

GI number: 18977848

Start: 1380121

End: 1380600

Strand: Reverse

Name: 18977848

Synonym: PF1476

Alternate gene names: NA

Gene position: 1380600-1380121 (Counterclockwise)

Preceding gene: 18977849

Following gene: 18977846

Centisome position: 72.35

GC content: 37.08

Gene sequence:

>480_bases
GTGAATACAGGGCTCCCCTTATCTTCTGATGTTTCTTTCTTTTTTGTCAACTTTTCAAGCATTTTTATTCACTTCAAGTA
TTGGGTAACCGAAAAATATTTTAATAAGATATGTTTTATGGTGAGAGAATATATTTCATCGAAGGTGATAAAAATGGAGG
AGCCTATACTCAGACTTAGGGATAAACTCACGAAAGAAATGTTGTGGATGTACATACTAAAGTTGCTCAAGGACAGGCCA
ATGTATGCGTATGAAATCAGAAACGAGCTAAAAAAGAGATTCGGCTTTGAACCAGCTACCGTGAGCTCATATGTAGTTCT
ATATAGGCTGGAAGAAGGAGGTTATGTATCCTCAGAATGGCACGAAAGTGAAGCAGGAAGACCTTCGAGAAAGTACTATA
GACTTACGGAAAAAGGAGAAAAGTTACTGGAAAAGGGAATAGAAACAATAGAGGACGTTTTAAACATGCTGAAGTCGTAA

Upstream 100 bases:

>100_bases
GCTGAAAAAGAAGATGTGAACTTAATGCCATACATTATTGAGGCCCACAAGCACTTAGCAACTCTCCAAGAGGTTACTGA
CGTACTAAGAGAAGTTTGGG

Downstream 100 bases:

>100_bases
TCAGCGTCCTCCTCCTCTTGGTTCTTTAGCTTTTGGCCTTAGCCTCTTGTATCCGCACTTTCTGCACTTTTTGGCTCCCC
ATGGGTTAGTTGCTCCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; ParR Family Transcriptional Regulator; Transcriptional Regulator PadR Family

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNTGLPLSSDVSFFFVNFSSIFIHFKYWVTEKYFNKICFMVREYISSKVIKMEEPILRLRDKLTKEMLWMYILKLLKDRP
MYAYEIRNELKKRFGFEPATVSSYVVLYRLEEGGYVSSEWHESEAGRPSRKYYRLTEKGEKLLEKGIETIEDVLNMLKS

Sequences:

>Translated_159_residues
MNTGLPLSSDVSFFFVNFSSIFIHFKYWVTEKYFNKICFMVREYISSKVIKMEEPILRLRDKLTKEMLWMYILKLLKDRP
MYAYEIRNELKKRFGFEPATVSSYVVLYRLEEGGYVSSEWHESEAGRPSRKYYRLTEKGEKLLEKGIETIEDVLNMLKS
>Mature_159_residues
MNTGLPLSSDVSFFFVNFSSIFIHFKYWVTEKYFNKICFMVREYISSKVIKMEEPILRLRDKLTKEMLWMYILKLLKDRP
MYAYEIRNELKKRFGFEPATVSSYVVLYRLEEGGYVSSEWHESEAGRPSRKYYRLTEKGEKLLEKGIETIEDVLNMLKS

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19078; Mature: 19078

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTGLPLSSDVSFFFVNFSSIFIHFKYWVTEKYFNKICFMVREYISSKVIKMEEPILRLR
CCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLTKEMLWMYILKLLKDRPMYAYEIRNELKKRFGFEPATVSSYVVLYRLEEGGYVSSEW
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCC
HESEAGRPSRKYYRLTEKGEKLLEKGIETIEDVLNMLKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTGLPLSSDVSFFFVNFSSIFIHFKYWVTEKYFNKICFMVREYISSKVIKMEEPILRLR
CCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLTKEMLWMYILKLLKDRPMYAYEIRNELKKRFGFEPATVSSYVVLYRLEEGGYVSSEW
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCC
HESEAGRPSRKYYRLTEKGEKLLEKGIETIEDVLNMLKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA