Definition Pyrococcus furiosus DSM 3638, complete genome.
Accession NC_003413
Length 1,908,256

Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 18977830

GI number: 18977830

Start: 1363240

End: 1364175

Strand: Reverse

Name: ydjH [C]

Synonym: PF1458

Alternate gene names: 18977830

Gene position: 1364175-1363240 (Counterclockwise)

Preceding gene: 18977832

Following gene: 18977825

Centisome position: 71.49

GC content: 42.2

Gene sequence:

>936_bases
ATGATTACTGCTTTCGGAGAAGTGCTGATTGATTTTATAGCAGCTGAAGAAGGGGACTTAGAGAATGTGAAAATTTTTGA
GAAGCACCCAGGAGGAGCGCCTGCAAATGTTGCTGTGGGGGTTTCAAGATTAGGTATTCCATCATTCTTAGTAAGCAAGG
TGGGAGATGATCCTTTTGGAAGATTTCTCATAAGGAGGTTAAAGGAGGAGGGCGTAAACACTGAAGGAGTTCTCATTGAC
AACGAGAAACATACTGGGGTGGTTTTTGTTCAATTAAAGGGTGCAAAGCCTTCTTTCATTCTCTACGACGAGGTTGCTTA
CTTTAACATAAAATTGAGTGAAGTCCCCTGGGAAATACTGGAGAGCTCAAAAATTGTTCACTTTGGTTCTGTGTTACTGG
CTAGAGAACCCAGCAGAGGAACAATGATAAAGGTCATTGAAACCCTAAAGGAGAAAAGCCTTGTAAGTTTTGATGTAAAT
ATTAGGAAAGATCTGTGGAGGAGCGAAGAGGAGTTAGTGGAAACATTGAAAAGAGTCCTGTCCAATGTTGATATCCTAAA
GTTGAGCGATGAAGAATTTAACCTATTAAAGGAGTATGGCTTAGAGCCTAGAGGGAAACTTATTACGGCCATTACTTATG
GGGCCGAGGGATGTAGAATTGAGAGTGATGAAGCGTCAATCTTTGTTCCTGCCTATAAAGTTTCTCCCGTAGATACTACT
GGGGCTGGAGATGCCTTTGTTTCTGCCCTTTTAGTAGGGCTTCTAGCCCTAGACAAACAAAAACTTGAAGAAAGCGATAT
GTTCCTTCTTGGCAAGTTTGCAAACCTTGTCGCTGGCCTCTCAACTCAGAAAAGAGGAGCTTGGAGCGTTCCCAGGAGAG
AAGAGTTGGAGAAGTACGAGGAGGGGAGAAAAATTTTTAGCTTAATAACTCTCTGA

Upstream 100 bases:

>100_bases
TCTGTAAAAGAGACAAGTCCTATCATTATGACACCTCCCTAATTTGTGGAGTTATACTCTTTAAATATGTATAGCAAAGA
AAGGTTAGAGGTGATCGATA

Downstream 100 bases:

>100_bases
CTCTCCTTTCAAAGTCGATGAATCTAGGAACTCCAATGAATTCAACTCTGTTATTTATGAGAATTGTAGGCGTTCCTAGA
ATGTTGTGCTCCATTGCCTT

Product: sugar kinase

Products: ADP; D-fructose 6-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MITAFGEVLIDFIAAEEGDLENVKIFEKHPGGAPANVAVGVSRLGIPSFLVSKVGDDPFGRFLIRRLKEEGVNTEGVLID
NEKHTGVVFVQLKGAKPSFILYDEVAYFNIKLSEVPWEILESSKIVHFGSVLLAREPSRGTMIKVIETLKEKSLVSFDVN
IRKDLWRSEEELVETLKRVLSNVDILKLSDEEFNLLKEYGLEPRGKLITAITYGAEGCRIESDEASIFVPAYKVSPVDTT
GAGDAFVSALLVGLLALDKQKLEESDMFLLGKFANLVAGLSTQKRGAWSVPRREELEKYEEGRKIFSLITL

Sequences:

>Translated_311_residues
MITAFGEVLIDFIAAEEGDLENVKIFEKHPGGAPANVAVGVSRLGIPSFLVSKVGDDPFGRFLIRRLKEEGVNTEGVLID
NEKHTGVVFVQLKGAKPSFILYDEVAYFNIKLSEVPWEILESSKIVHFGSVLLAREPSRGTMIKVIETLKEKSLVSFDVN
IRKDLWRSEEELVETLKRVLSNVDILKLSDEEFNLLKEYGLEPRGKLITAITYGAEGCRIESDEASIFVPAYKVSPVDTT
GAGDAFVSALLVGLLALDKQKLEESDMFLLGKFANLVAGLSTQKRGAWSVPRREELEKYEEGRKIFSLITL
>Mature_311_residues
MITAFGEVLIDFIAAEEGDLENVKIFEKHPGGAPANVAVGVSRLGIPSFLVSKVGDDPFGRFLIRRLKEEGVNTEGVLID
NEKHTGVVFVQLKGAKPSFILYDEVAYFNIKLSEVPWEILESSKIVHFGSVLLAREPSRGTMIKVIETLKEKSLVSFDVN
IRKDLWRSEEELVETLKRVLSNVDILKLSDEEFNLLKEYGLEPRGKLITAITYGAEGCRIESDEASIFVPAYKVSPVDTT
GAGDAFVSALLVGLLALDKQKLEESDMFLLGKFANLVAGLSTQKRGAWSVPRREELEKYEEGRKIFSLITL

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=283, Percent_Identity=27.208480565371, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI87081971, Length=288, Percent_Identity=25, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI20128807, Length=286, Percent_Identity=28.6713286713287, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.4

Molecular weight: Translated: 34509; Mature: 34509

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAFGEVLIDFIAAEEGDLENVKIFEKHPGGAPANVAVGVSRLGIPSFLVSKVGDDPFG
CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHH
RFLIRRLKEEGVNTEGVLIDNEKHTGVVFVQLKGAKPSFILYDEVAYFNIKLSEVPWEIL
HHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEEEEEEEECCCCHHHH
ESSKIVHFGSVLLAREPSRGTMIKVIETLKEKSLVSFDVNIRKDLWRSEEELVETLKRVL
CCCCEEEECEEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHCCCHHHHHHHHHHHH
SNVDILKLSDEEFNLLKEYGLEPRGKLITAITYGAEGCRIESDEASIFVPAYKVSPVDTT
CCCEEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCEEEEEEEEECCCCCC
GAGDAFVSALLVGLLALDKQKLEESDMFLLGKFANLVAGLSTQKRGAWSVPRREELEKYE
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EGRKIFSLITL
HHHHHHHHHCC
>Mature Secondary Structure
MITAFGEVLIDFIAAEEGDLENVKIFEKHPGGAPANVAVGVSRLGIPSFLVSKVGDDPFG
CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHH
RFLIRRLKEEGVNTEGVLIDNEKHTGVVFVQLKGAKPSFILYDEVAYFNIKLSEVPWEIL
HHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEEEEEEEECCCCHHHH
ESSKIVHFGSVLLAREPSRGTMIKVIETLKEKSLVSFDVNIRKDLWRSEEELVETLKRVL
CCCCEEEECEEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHCCCHHHHHHHHHHHH
SNVDILKLSDEEFNLLKEYGLEPRGKLITAITYGAEGCRIESDEASIFVPAYKVSPVDTT
CCCEEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCEEEEEEEEECCCCCC
GAGDAFVSALLVGLLALDKQKLEESDMFLLGKFANLVAGLSTQKRGAWSVPRREELEKYE
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EGRKIFSLITL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-fructose

Specific reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]