Click here to switch to the map view.

The map label for this gene is 18977738

Identifier: 18977738

GI number: 18977738

Start: 1284317

End: 1285096

Strand: Reverse

Name: 18977738

Synonym: PF1366

Alternate gene names: NA

Gene position: 1285096-1284317 (Counterclockwise)

Preceding gene: 18977746

Following gene: 18977736

Centisome position: 67.34

GC content: 44.62

Gene sequence:

>780_bases
ATGCAGGATACTGTTAGGATAAGCTGTGGGGTGTCAGGTTTAAGTTACTGGCAGTACTTTAGAAAAAGAAGGGGGAACAT
GAAGTCTGAAACCATTATTTACTGGGTGGTTTCAGCCTTAAAACCCTTTCGTCGCAACAAAATCCCACCAGAAAAGAAAA
TCAGGGGAGTAGAATTATACCTGCGAGGCCTCAGTTACCGGCAAACCGCCAGAATACTCAAAATCAGTCACGTAACAGTC
TGGGAGGCAGTCCAAAAACTCGCAGAAGCAGTTTACAAGCCAAAAATCCTCGCAGTCAAAAAACAGCGAAACTTCATCGC
AGTTGACGAAACAGTAATAAAAATCAACGGGAAGAAAAGATACCTCTGGGCTGCAATTGACGTTGAGAGCAAGGAAGTTT
TAGCAGTCTGGATTACGACTGTTAGAAACTGGTGGGTTGCCAGGGATTTCATTCTGGTTGTTTTAAAGTCGTGTGAAGGG
CAGCCTGTCTTTCTGGTTGACAGGGCGAGCTGGTATAAGTCTGCTTTTAAGAGTTTGAGGTTGGGTTATCTGCATGTGAC
TTTCGGGCCGAGGAACAGTGTTGAGCGCTGGTTTAGGACGTTGAAGGAGAGGACGAAGCGTTTCTGGAATAATTTCAGGG
GTAAAGACTGGAGGAGGGTTCATAGGTTTGTTTTTCTGTTTGCCTTCTGGTATAATTTTGTCAGAATTCATTCTAGTTTT
GGTGATCCGCCTGGTGATGTTACTGAATGGCTTCAGGAGGTGATGCCCCAGTTATCCTAA

Upstream 100 bases:

>100_bases
ACTTCACGTAACTTGGTTTGGCCATCATCCATCCCTCCTTTAGTCATCGTTCATCTGTCGAGGTTGGTTGAAAACTCTGC
TTTAAAAGGATTTTGGTTAG

Downstream 100 bases:

>100_bases
CAGTATCTAATCGATAAGTTCTTTGGCTACATCATCTGAATAATATTCTAATGGGGACCTTCCGGATACGCATCAGGATA
CCTCAGTGCTATATAGTTCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQDTVRISCGVSGLSYWQYFRKRRGNMKSETIIYWVVSALKPFRRNKIPPEKKIRGVELYLRGLSYRQTARILKISHVTV
WEAVQKLAEAVYKPKILAVKKQRNFIAVDETVIKINGKKRYLWAAIDVESKEVLAVWITTVRNWWVARDFILVVLKSCEG
QPVFLVDRASWYKSAFKSLRLGYLHVTFGPRNSVERWFRTLKERTKRFWNNFRGKDWRRVHRFVFLFAFWYNFVRIHSSF
GDPPGDVTEWLQEVMPQLS

Sequences:

>Translated_259_residues
MQDTVRISCGVSGLSYWQYFRKRRGNMKSETIIYWVVSALKPFRRNKIPPEKKIRGVELYLRGLSYRQTARILKISHVTV
WEAVQKLAEAVYKPKILAVKKQRNFIAVDETVIKINGKKRYLWAAIDVESKEVLAVWITTVRNWWVARDFILVVLKSCEG
QPVFLVDRASWYKSAFKSLRLGYLHVTFGPRNSVERWFRTLKERTKRFWNNFRGKDWRRVHRFVFLFAFWYNFVRIHSSF
GDPPGDVTEWLQEVMPQLS
>Mature_259_residues
MQDTVRISCGVSGLSYWQYFRKRRGNMKSETIIYWVVSALKPFRRNKIPPEKKIRGVELYLRGLSYRQTARILKISHVTV
WEAVQKLAEAVYKPKILAVKKQRNFIAVDETVIKINGKKRYLWAAIDVESKEVLAVWITTVRNWWVARDFILVVLKSCEG
QPVFLVDRASWYKSAFKSLRLGYLHVTFGPRNSVERWFRTLKERTKRFWNNFRGKDWRRVHRFVFLFAFWYNFVRIHSSF
GDPPGDVTEWLQEVMPQLS

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30901; Mature: 30901

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDTVRISCGVSGLSYWQYFRKRRGNMKSETIIYWVVSALKPFRRNKIPPEKKIRGVELY
CCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LRGLSYRQTARILKISHVTVWEAVQKLAEAVYKPKILAVKKQRNFIAVDETVIKINGKKR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEEECCCEE
YLWAAIDVESKEVLAVWITTVRNWWVARDFILVVLKSCEGQPVFLVDRASWYKSAFKSLR
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHC
LGYLHVTFGPRNSVERWFRTLKERTKRFWNNFRGKDWRRVHRFVFLFAFWYNFVRIHSSF
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDPPGDVTEWLQEVMPQLS
CCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDTVRISCGVSGLSYWQYFRKRRGNMKSETIIYWVVSALKPFRRNKIPPEKKIRGVELY
CCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LRGLSYRQTARILKISHVTVWEAVQKLAEAVYKPKILAVKKQRNFIAVDETVIKINGKKR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEEECCCEE
YLWAAIDVESKEVLAVWITTVRNWWVARDFILVVLKSCEGQPVFLVDRASWYKSAFKSLR
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHC
LGYLHVTFGPRNSVERWFRTLKERTKRFWNNFRGKDWRRVHRFVFLFAFWYNFVRIHSSF
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDPPGDVTEWLQEVMPQLS
CCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]