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The map label for this gene is 18977737

Identifier: 18977737

GI number: 18977737

Start: 1283829

End: 1284269

Strand: Direct

Name: 18977737

Synonym: PF1365

Alternate gene names: NA

Gene position: 1283829-1284269 (Clockwise)

Preceding gene: 18977732

Following gene: 18977739

Centisome position: 67.28

GC content: 39.46

Gene sequence:

>441_bases
GTGTTTCTCCCATACTTATCGAGTCCTTATCCCCTTTACCTTATTAACCTTATGTTAATGGAATGTCCACCAGACATCTA
TTCTTTTTCAACCCAAAACTCTAATAATCAATTGAAGGGATTATTCATGTTCAAGAAAAAAGAATATGATCGGTGGATGG
TAGAGGCAAAGAGAACTCTTGCTTCTGCGTATTCCGATTTGAGAGAAGGGTATTATGAATGGGCAAGTTTTAAAGCCCAA
CAAGCAGCAGAATTAGCTGTGAAAGCTATTCTAAGAGGGTTGAGCTTTGCTCCCATAGGACACTCAATAACGAAGCTCTT
AAGAGAGCTAGCTGAAAACAACATAAAGGGTCCTAAGAAGATTCTTTATTTTGCAATGAAGCTAGACAGGAACTATATAG
CACTGAGGTATCCTGATGCGTATCCGGAAGGTCCCCATTAG

Upstream 100 bases:

>100_bases
TCGTGTTTCTCAGCTAATCGCTTAGCTATCTCGTAAAGTCTTCTTTCAACTCCTCCTTTTACCCAAGGGTAAATTACATC
ATAGATAAAGGCAATTCTTA

Downstream 100 bases:

>100_bases
AATATTATTCAGATGATGTAGCCAAAGAACTTATCGATTAGATACTGTTAGGATAACTGGGGCATCACCTCCTGAAGCCA
TTCAGTAACATCACCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain Protein; Hepn Domain

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFLPYLSSPYPLYLINLMLMECPPDIYSFSTQNSNNQLKGLFMFKKKEYDRWMVEAKRTLASAYSDLREGYYEWASFKAQ
QAAELAVKAILRGLSFAPIGHSITKLLRELAENNIKGPKKILYFAMKLDRNYIALRYPDAYPEGPH

Sequences:

>Translated_146_residues
MFLPYLSSPYPLYLINLMLMECPPDIYSFSTQNSNNQLKGLFMFKKKEYDRWMVEAKRTLASAYSDLREGYYEWASFKAQ
QAAELAVKAILRGLSFAPIGHSITKLLRELAENNIKGPKKILYFAMKLDRNYIALRYPDAYPEGPH
>Mature_146_residues
MFLPYLSSPYPLYLINLMLMECPPDIYSFSTQNSNNQLKGLFMFKKKEYDRWMVEAKRTLASAYSDLREGYYEWASFKAQ
QAAELAVKAILRGLSFAPIGHSITKLLRELAENNIKGPKKILYFAMKLDRNYIALRYPDAYPEGPH

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16960; Mature: 16960

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPYLSSPYPLYLINLMLMECPPDIYSFSTQNSNNQLKGLFMFKKKEYDRWMVEAKRTL
CCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
ASAYSDLREGYYEWASFKAQQAAELAVKAILRGLSFAPIGHSITKLLRELAENNIKGPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
ILYFAMKLDRNYIALRYPDAYPEGPH
HHHHHHHHCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MFLPYLSSPYPLYLINLMLMECPPDIYSFSTQNSNNQLKGLFMFKKKEYDRWMVEAKRTL
CCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
ASAYSDLREGYYEWASFKAQQAAELAVKAILRGLSFAPIGHSITKLLRELAENNIKGPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
ILYFAMKLDRNYIALRYPDAYPEGPH
HHHHHHHHCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA