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The map label for this gene is tuaC [H]

Identifier: 18977733

GI number: 18977733

Start: 1279379

End: 1280530

Strand: Reverse

Name: tuaC [H]

Synonym: PF1361

Alternate gene names: 18977733

Gene position: 1280530-1279379 (Counterclockwise)

Preceding gene: 18977734

Following gene: 18977725

Centisome position: 67.1

GC content: 33.94

Gene sequence:

>1152_bases
ATGGATGAAAACAACCTCTTGGTTGTCACAAACATATTCCCAAATAAGGATGGCTCCTATTATCAAGGAGTATTTGTAAA
AGAACAGATAAAATTTCTGAAGAATTATTTTGATAATGTGTATGTTATAAGTCCCTGGCCCTATGGATATAAAATGTTTC
TTAAAGATTATTCCTACGAGAACGTTTACGTATATTATCCTAGGTTTATTCACTTTCCCATAGGGTATTTTAGAAGAAGA
CTTGGAGAGAATTATTACAAGACTATTCTAAAGGTAATAAAAAGAGAGAATCTGAAATTTAAGATTGCTCATGCTCATTT
CACATGGCCGAGTGGATATGCAACTCACATCTTAAAAAGAACACACAAAATACCATTTGTAGTAACAACTCATGGACTTC
ACGATACAAGAATGAACTTTCTTCTAAAAAATGGAGCCATGGAGGTTTGGAAATCCGCAGATGCTATTATCAATGTTTCA
AGAAAATGTGTGAAGCTATTAATGAGAGTGGGTATCCCAGAAGATAAATTGTATTATATCCCAAATGGTGTCGATACATC
TTTATTTTATCCCCAGGAGACTGCACTAATTCGAAAGGAATTAAATATCCCTATTGATAAAAAAATATTAATTAGTGTTG
GAAATCTTGTGGAAAAAAAGGGGTTTGAATACTTGATTAGGGCTATGAAAATAATATTGCATGCAAGAGATGATGTTTTG
CTATATATAATTGGAGAAGGACCACTTAGAAAAAGACTTGAAAATATAACAAGAGAACTAAAGCTGGAGGAGCATGTATT
CCTTGTTGGTCCAAAACCCCATAGAGACATTCCATTGTGGATTAATGCAGGAGATTTATTTGTACTTCCCAGTTTAGTAG
AAAATTTTGGAGTTGTAAATATTGAAGCACTAGCTTGTGGAAAACCCGTTATTTCAACAATCAATGGGGGAAGTGAAGAA
GTAATAACATCGGAAGAATATGGCTTACTATGCCCGCCTAGAGACCCTGAATGCTTGGCAGAGAAAATTTTAATGGCCCT
AAACAAAGAATGGGACAGAGAAAAAATAAGAAAATATGCTGAGCAGTTTGATTGGAGGAACATAGCAAGGCAAATTTTTA
AGGTGTATGAAGATGTTTTATCTAACTATTGA

Upstream 100 bases:

>100_bases
CCCAAACCACCAAGCATGAGAAGTTAAAAATAAAAATAATTAACTATTCCCATAAATACGCAGAGAAGTTTATAAAGGCA
ATCATGGAATAAGAGTTTGT

Downstream 100 bases:

>100_bases
GGAACTCTACTAACTTATCTTTCAAATATTCCCAACTATAATAAGTTCTAATGAATTTTCTTCCAGAAACAGCTTTCTTT
CGTAGAATTTTTGCATCGAG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDENNLLVVTNIFPNKDGSYYQGVFVKEQIKFLKNYFDNVYVISPWPYGYKMFLKDYSYENVYVYYPRFIHFPIGYFRRR
LGENYYKTILKVIKRENLKFKIAHAHFTWPSGYATHILKRTHKIPFVVTTHGLHDTRMNFLLKNGAMEVWKSADAIINVS
RKCVKLLMRVGIPEDKLYYIPNGVDTSLFYPQETALIRKELNIPIDKKILISVGNLVEKKGFEYLIRAMKIILHARDDVL
LYIIGEGPLRKRLENITRELKLEEHVFLVGPKPHRDIPLWINAGDLFVLPSLVENFGVVNIEALACGKPVISTINGGSEE
VITSEEYGLLCPPRDPECLAEKILMALNKEWDREKIRKYAEQFDWRNIARQIFKVYEDVLSNY

Sequences:

>Translated_383_residues
MDENNLLVVTNIFPNKDGSYYQGVFVKEQIKFLKNYFDNVYVISPWPYGYKMFLKDYSYENVYVYYPRFIHFPIGYFRRR
LGENYYKTILKVIKRENLKFKIAHAHFTWPSGYATHILKRTHKIPFVVTTHGLHDTRMNFLLKNGAMEVWKSADAIINVS
RKCVKLLMRVGIPEDKLYYIPNGVDTSLFYPQETALIRKELNIPIDKKILISVGNLVEKKGFEYLIRAMKIILHARDDVL
LYIIGEGPLRKRLENITRELKLEEHVFLVGPKPHRDIPLWINAGDLFVLPSLVENFGVVNIEALACGKPVISTINGGSEE
VITSEEYGLLCPPRDPECLAEKILMALNKEWDREKIRKYAEQFDWRNIARQIFKVYEDVLSNY
>Mature_383_residues
MDENNLLVVTNIFPNKDGSYYQGVFVKEQIKFLKNYFDNVYVISPWPYGYKMFLKDYSYENVYVYYPRFIHFPIGYFRRR
LGENYYKTILKVIKRENLKFKIAHAHFTWPSGYATHILKRTHKIPFVVTTHGLHDTRMNFLLKNGAMEVWKSADAIINVS
RKCVKLLMRVGIPEDKLYYIPNGVDTSLFYPQETALIRKELNIPIDKKILISVGNLVEKKGFEYLIRAMKIILHARDDVL
LYIIGEGPLRKRLENITRELKLEEHVFLVGPKPHRDIPLWINAGDLFVLPSLVENFGVVNIEALACGKPVISTINGGSEE
VITSEEYGLLCPPRDPECLAEKILMALNKEWDREKIRKYAEQFDWRNIARQIFKVYEDVLSNY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=291, Percent_Identity=28.8659793814433, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1788357, Length=194, Percent_Identity=28.3505154639175, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788363, Length=237, Percent_Identity=27.4261603375527, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17532709, Length=399, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI9755344, Length=314, Percent_Identity=23.8853503184713, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24654571, Length=158, Percent_Identity=30.379746835443, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44870; Mature: 44870

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENNLLVVTNIFPNKDGSYYQGVFVKEQIKFLKNYFDNVYVISPWPYGYKMFLKDYSYE
CCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCC
NVYVYYPRFIHFPIGYFRRRLGENYYKTILKVIKRENLKFKIAHAHFTWPSGYATHILKR
CEEEECCCCEECCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHH
THKIPFVVTTHGLHDTRMNFLLKNGAMEVWKSADAIINVSRKCVKLLMRVGIPEDKLYYI
HCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEC
PNGVDTSLFYPQETALIRKELNIPIDKKILISVGNLVEKKGFEYLIRAMKIILHARDDVL
CCCCCCCEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEE
LYIIGEGPLRKRLENITRELKLEEHVFLVGPKPHRDIPLWINAGDLFVLPSLVENFGVVN
EEEECCCHHHHHHHHHHHHHECCCEEEEECCCCCCCCEEEEECCCEEEEHHHHHHCCCEE
IEALACGKPVISTINGGSEEVITSEEYGLLCPPRDPECLAEKILMALNKEWDREKIRKYA
EEEEECCCCHHHHCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
EQFDWRNIARQIFKVYEDVLSNY
HHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDENNLLVVTNIFPNKDGSYYQGVFVKEQIKFLKNYFDNVYVISPWPYGYKMFLKDYSYE
CCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCC
NVYVYYPRFIHFPIGYFRRRLGENYYKTILKVIKRENLKFKIAHAHFTWPSGYATHILKR
CEEEECCCCEECCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHH
THKIPFVVTTHGLHDTRMNFLLKNGAMEVWKSADAIINVSRKCVKLLMRVGIPEDKLYYI
HCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEC
PNGVDTSLFYPQETALIRKELNIPIDKKILISVGNLVEKKGFEYLIRAMKIILHARDDVL
CCCCCCCEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEE
LYIIGEGPLRKRLENITRELKLEEHVFLVGPKPHRDIPLWINAGDLFVLPSLVENFGVVN
EEEECCCHHHHHHHHHHHHHECCCEEEEECCCCCCCCEEEEECCCEEEEHHHHHHCCCEE
IEALACGKPVISTINGGSEEVITSEEYGLLCPPRDPECLAEKILMALNKEWDREKIRKYA
EEEEECCCCHHHHCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
EQFDWRNIARQIFKVYEDVLSNY
HHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]