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The map label for this gene is epsD [H]

Identifier: 18977730

GI number: 18977730

Start: 1276458

End: 1277366

Strand: Direct

Name: epsD [H]

Synonym: PF1358

Alternate gene names: 18977730

Gene position: 1276458-1277366 (Clockwise)

Preceding gene: 33359561

Following gene: 18977731

Centisome position: 66.89

GC content: 35.09

Gene sequence:

>909_bases
ATGAATAATTTGTTTGACAGGATTGCATCCCGCTATGTAGATGGGGCTGAAGTGTTTTACGGATGGATGAATATGAGTCT
CAATCAGATTAAAAGAGCCAAAAAGTTAGGGATTAAGACAATTGTAGAGTGTGCTTCTTCCCATCCTCTCTATCAGCTAA
AGATATTGGAGGAGGAATATCAAAAATGGAACATCCCCTTTAAGGTTGGAAGTCAAAAAATTTATCTGAAAGCCCTAAAA
GAAATCAAAGAGGCAGATTTTATAAAAATACCTTCGGATTTTGTTCAAGAGACTTTCATAAAGAACGGGATCCCAGAAGA
GAAGCTTATTAAGATACCTTTTGGTGTGGATTTAGAAAAGTTTCAACCTAAAGACAATTATAACAATGAGATTTTTAGAG
CAGTATTTGTTGGTACTGTTAGCATAAGAAAAGGTATTCCTTATCTTTTAAAAGCTTGGAGTGAGCTTAATTTAAAAGAC
GCTCAATTATATGTTGTTGGAGCGATTTCTCCAGACGTTAAAATAATTATTGCGAAGTACAGCAAACTTAAAAACATTAT
ATTTACTGGCAGGGTTAAGGATATTGTCCCTATACTTAGAGAGTCTAATGTGTTTGTATTTCCCTCTATCGAGGAAGGAT
CTGCATTAGTTACCTACGAGGCAATGGCTTCGGGATTACCAAGCATAGTTACATACAACAGTGGTTCAATAGTTCGACAT
GGAAAAGATGGATTTGTGATACCGATTAGAGATATCAAAAGCCTAAAAGACGGAATTCAATACTTTTATGAGAACCCGTC
TGAGGTCAAAAGAATGGGGAAAAATGCAAGAAAACATGTAGAAAAGTATACTTGGTATAATTATGGGGAGAATTTATATA
ATGAACTTAAAAGGCTTGGCCTGCTTTAA

Upstream 100 bases:

>100_bases
AAGCTCGAAAATCAAAAAATTAAAATACCTAAAGTACCTGGACATGCCTCTTGGTTTTACAAGAGCAAGGATACTTCCAG
TATTGCCCTAGTACGAGATT

Downstream 100 bases:

>100_bases
ATTAACAGTTATGGAGGGTTTAGATGAAGGCGCATGTGTCAATTGTTGTTCCAACTTATAACCGCAAGAAAAAGTTACAG
CAGTGTTTAAAGGCTCTTAT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNNLFDRIASRYVDGAEVFYGWMNMSLNQIKRAKKLGIKTIVECASSHPLYQLKILEEEYQKWNIPFKVGSQKIYLKALK
EIKEADFIKIPSDFVQETFIKNGIPEEKLIKIPFGVDLEKFQPKDNYNNEIFRAVFVGTVSIRKGIPYLLKAWSELNLKD
AQLYVVGAISPDVKIIIAKYSKLKNIIFTGRVKDIVPILRESNVFVFPSIEEGSALVTYEAMASGLPSIVTYNSGSIVRH
GKDGFVIPIRDIKSLKDGIQYFYENPSEVKRMGKNARKHVEKYTWYNYGENLYNELKRLGLL

Sequences:

>Translated_302_residues
MNNLFDRIASRYVDGAEVFYGWMNMSLNQIKRAKKLGIKTIVECASSHPLYQLKILEEEYQKWNIPFKVGSQKIYLKALK
EIKEADFIKIPSDFVQETFIKNGIPEEKLIKIPFGVDLEKFQPKDNYNNEIFRAVFVGTVSIRKGIPYLLKAWSELNLKD
AQLYVVGAISPDVKIIIAKYSKLKNIIFTGRVKDIVPILRESNVFVFPSIEEGSALVTYEAMASGLPSIVTYNSGSIVRH
GKDGFVIPIRDIKSLKDGIQYFYENPSEVKRMGKNARKHVEKYTWYNYGENLYNELKRLGLL
>Mature_302_residues
MNNLFDRIASRYVDGAEVFYGWMNMSLNQIKRAKKLGIKTIVECASSHPLYQLKILEEEYQKWNIPFKVGSQKIYLKALK
EIKEADFIKIPSDFVQETFIKNGIPEEKLIKIPFGVDLEKFQPKDNYNNEIFRAVFVGTVSIRKGIPYLLKAWSELNLKD
AQLYVVGAISPDVKIIIAKYSKLKNIIFTGRVKDIVPILRESNVFVFPSIEEGSALVTYEAMASGLPSIVTYNSGSIVRH
GKDGFVIPIRDIKSLKDGIQYFYENPSEVKRMGKNARKHVEKYTWYNYGENLYNELKRLGLL

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34726; Mature: 34726

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLFDRIASRYVDGAEVFYGWMNMSLNQIKRAKKLGIKTIVECASSHPLYQLKILEEEY
CCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH
QKWNIPFKVGSQKIYLKALKEIKEADFIKIPSDFVQETFIKNGIPEEKLIKIPFGVDLEK
HHCCCCEEECCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCCHHHEEECCCCCCHHH
FQPKDNYNNEIFRAVFVGTVSIRKGIPYLLKAWSELNLKDAQLYVVGAISPDVKIIIAKY
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEHH
SKLKNIIFTGRVKDIVPILRESNVFVFPSIEEGSALVTYEAMASGLPSIVTYNSGSIVRH
HHHHHHEEECCHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHCCCCCEEEECCCCEEEE
GKDGFVIPIRDIKSLKDGIQYFYENPSEVKRMGKNARKHVEKYTWYNYGENLYNELKRLG
CCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
LL
CC
>Mature Secondary Structure
MNNLFDRIASRYVDGAEVFYGWMNMSLNQIKRAKKLGIKTIVECASSHPLYQLKILEEEY
CCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH
QKWNIPFKVGSQKIYLKALKEIKEADFIKIPSDFVQETFIKNGIPEEKLIKIPFGVDLEK
HHCCCCEEECCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCCHHHEEECCCCCCHHH
FQPKDNYNNEIFRAVFVGTVSIRKGIPYLLKAWSELNLKDAQLYVVGAISPDVKIIIAKY
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEHH
SKLKNIIFTGRVKDIVPILRESNVFVFPSIEEGSALVTYEAMASGLPSIVTYNSGSIVRH
HHHHHHEEECCHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHCCCCCEEEECCCCEEEE
GKDGFVIPIRDIKSLKDGIQYFYENPSEVKRMGKNARKHVEKYTWYNYGENLYNELKRLG
CCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]