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The map label for this gene is yafJ [C]

Identifier: 18977689

GI number: 18977689

Start: 1241194

End: 1241661

Strand: Direct

Name: yafJ [C]

Synonym: PF1317

Alternate gene names: 18977689

Gene position: 1241194-1241661 (Clockwise)

Preceding gene: 18977688

Following gene: 18977690

Centisome position: 65.04

GC content: 46.79

Gene sequence:

>468_bases
ATGTGTGAGCTCTTCGACGTTAACGCAAACAAAGGGGTGAGCGTAAACTTCACGTGGCGGGGCTTTGTAAGGAAAGGCGA
GCTTAACCCCCACGGCTGGGGCATTAGCTGGTATCTAACAGCTGTCAACGGAAAGAGAGCCGCTTCACTGATAAAACAAC
CTATCCCGGCTTACGAAAGTATGATTGCCCTCACACTTCCAAGACTTAACATAAGGAGCCAAATTATCATAAGCCACGTA
AGATTCGCCACCAGTGAAATCAACTACCTGGACACTCATCCTTTTGTGAGGAGAATTAAAAGCATTGGACAGTATGATGA
GTGGATTTTCGCCCACAATGGAGTACTGAACGGTGTTAAAGAACTGCCCAAACGCTTCAAGCCTTTAGGAACGACGGACT
CAGAAGCAGCATTCTGCTACATAATGGAGAACTTGGAGGGGATAGGAACCATGAGAGCTCTTCACTAA

Upstream 100 bases:

>100_bases
CAGAGCCTACAGTAATCTGCAGATTTAGGAGAGACTTTGACTTCGGAAGCAATAGGATAGTAATTAGGATTTACGAAGTA
GTACCGTGAGGGACGGGGAT

Downstream 100 bases:

>100_bases
ACTATATCAGCTTTTAAGCCAACTCAGCGATTACGGGACACTAAACGTTCTGATGAGCAATGGAAGATATCTCTTTGCAT
ATAGTCATTATCCGAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MCELFDVNANKGVSVNFTWRGFVRKGELNPHGWGISWYLTAVNGKRAASLIKQPIPAYESMIALTLPRLNIRSQIIISHV
RFATSEINYLDTHPFVRRIKSIGQYDEWIFAHNGVLNGVKELPKRFKPLGTTDSEAAFCYIMENLEGIGTMRALH

Sequences:

>Translated_155_residues
MCELFDVNANKGVSVNFTWRGFVRKGELNPHGWGISWYLTAVNGKRAASLIKQPIPAYESMIALTLPRLNIRSQIIISHV
RFATSEINYLDTHPFVRRIKSIGQYDEWIFAHNGVLNGVKELPKRFKPLGTTDSEAAFCYIMENLEGIGTMRALH
>Mature_155_residues
MCELFDVNANKGVSVNFTWRGFVRKGELNPHGWGISWYLTAVNGKRAASLIKQPIPAYESMIALTLPRLNIRSQIIISHV
RFATSEINYLDTHPFVRRIKSIGQYDEWIFAHNGVLNGVKELPKRFKPLGTTDSEAAFCYIMENLEGIGTMRALH

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=150, Percent_Identity=38, Blast_Score=93, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 17595; Mature: 17595

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCELFDVNANKGVSVNFTWRGFVRKGELNPHGWGISWYLTAVNGKRAASLIKQPIPAYES
CCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHH
MIALTLPRLNIRSQIIISHVRFATSEINYLDTHPFVRRIKSIGQYDEWIFAHNGVLNGVK
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHEEEECCCHHHHHH
ELPKRFKPLGTTDSEAAFCYIMENLEGIGTMRALH
HHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHCCC
>Mature Secondary Structure
MCELFDVNANKGVSVNFTWRGFVRKGELNPHGWGISWYLTAVNGKRAASLIKQPIPAYES
CCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHH
MIALTLPRLNIRSQIIISHVRFATSEINYLDTHPFVRRIKSIGQYDEWIFAHNGVLNGVK
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHEEEECCCHHHHHH
ELPKRFKPLGTTDSEAAFCYIMENLEGIGTMRALH
HHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]