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The map label for this gene is ycbL [C]

Identifier: 18977673

GI number: 18977673

Start: 1225224

End: 1225910

Strand: Reverse

Name: ycbL [C]

Synonym: PF1301

Alternate gene names: 18977673

Gene position: 1225910-1225224 (Counterclockwise)

Preceding gene: 18977674

Following gene: 18977672

Centisome position: 64.24

GC content: 39.3

Gene sequence:

>687_bases
ATGGTTCCGATCATAATAAAGCCGGACATCTTAATGTTAAAGGGAGAATATCTTGATTCCAACATATACTTTCTAAAAAG
TGGGAAAGAGCTGCTGATAGTTGATAGTGGAACGGGAGTTTTTTGGAATAGATATCTAAGCATAGCTCAACAGGAGGGAT
GGTTTAAGAACATATCTAGGGTTGTGATTTTCAATACCCACGAACACTTTGATCATGTTGGGGGTAATCATATTTTCATG
AAATTCTTTAAAGAAAAAGGAATAGAAGTTGAGTTTGCTTCCCATAAAGATACGGCAAGAACACTCGAGGAGGGAGATGA
CTCAATAATCTTATCTTACCATTATGGCAGAAAGTACGAGCCCCATCCAGTAGATATTAAGCTTAAGGATGGAGATCTTC
TCTCCATAGGGGATGTTAATCTAACGGTAATTCACACTCCAGGACACACTCAGGGGAGTGCTTGCTTATACTATGAAGAC
GAAAGAATAATGTTCTCAGGGGATACAGTTTTCTTAAATGCATATGGAAGGACAGATTTGCCAACGGGGGATGAAGAAGA
ACTGATAAGATCTCTAGAGAGACTTGCAAGATATGAAGTTAGACTTGGCCTCCCTGGGCATGGAAAGTTAATAGATGATT
GGAAGTCTAACATCTATAGAATACTCGACCATCTGGAGGGGCTTTAA

Upstream 100 bases:

>100_bases
GAGATAAAAAGGGCGATGAAGAGTTTAACCCCTCCTGACGGTTGCGCTCCCCCGGATGAGGAGGCGGTCCCCCCTGGAGC
CCTTCTTTGAGGTGAAAACT

Downstream 100 bases:

>100_bases
TGAGAAAAGGGAGCGTAAAAGAAGTTTTAGCAAAAATAAAATATGATCCCAGGGAGAATGAGGAAGATTACTTTATAATA
ATCGAACACAGAGGAAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVPIIIKPDILMLKGEYLDSNIYFLKSGKELLIVDSGTGVFWNRYLSIAQQEGWFKNISRVVIFNTHEHFDHVGGNHIFM
KFFKEKGIEVEFASHKDTARTLEEGDDSIILSYHYGRKYEPHPVDIKLKDGDLLSIGDVNLTVIHTPGHTQGSACLYYED
ERIMFSGDTVFLNAYGRTDLPTGDEEELIRSLERLARYEVRLGLPGHGKLIDDWKSNIYRILDHLEGL

Sequences:

>Translated_228_residues
MVPIIIKPDILMLKGEYLDSNIYFLKSGKELLIVDSGTGVFWNRYLSIAQQEGWFKNISRVVIFNTHEHFDHVGGNHIFM
KFFKEKGIEVEFASHKDTARTLEEGDDSIILSYHYGRKYEPHPVDIKLKDGDLLSIGDVNLTVIHTPGHTQGSACLYYED
ERIMFSGDTVFLNAYGRTDLPTGDEEELIRSLERLARYEVRLGLPGHGKLIDDWKSNIYRILDHLEGL
>Mature_228_residues
MVPIIIKPDILMLKGEYLDSNIYFLKSGKELLIVDSGTGVFWNRYLSIAQQEGWFKNISRVVIFNTHEHFDHVGGNHIFM
KFFKEKGIEVEFASHKDTARTLEEGDDSIILSYHYGRKYEPHPVDIKLKDGDLLSIGDVNLTVIHTPGHTQGSACLYYED
ERIMFSGDTVFLNAYGRTDLPTGDEEELIRSLERLARYEVRLGLPGHGKLIDDWKSNIYRILDHLEGL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42822880, Length=206, Percent_Identity=30.0970873786408, Blast_Score=78, Evalue=5e-15,
Organism=Escherichia coli, GI1787158, Length=164, Percent_Identity=31.7073170731707, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26175; Mature: 26175

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPIIIKPDILMLKGEYLDSNIYFLKSGKELLIVDSGTGVFWNRYLSIAQQEGWFKNISR
CCCEEECCCEEEEECCEECCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCCE
VVIFNTHEHFDHVGGNHIFMKFFKEKGIEVEFASHKDTARTLEEGDDSIILSYHYGRKYE
EEEEECHHHHHHCCCCCEEEEEHHHCCCEEEECCCCCHHHHHHCCCCEEEEEEECCCCCC
PHPVDIKLKDGDLLSIGDVNLTVIHTPGHTQGSACLYYEDERIMFSGDTVFLNAYGRTDL
CCCEEEEECCCCEEEECCCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEEEECCCCCC
PTGDEEELIRSLERLARYEVRLGLPGHGKLIDDWKSNIYRILDHLEGL
CCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVPIIIKPDILMLKGEYLDSNIYFLKSGKELLIVDSGTGVFWNRYLSIAQQEGWFKNISR
CCCEEECCCEEEEECCEECCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCCE
VVIFNTHEHFDHVGGNHIFMKFFKEKGIEVEFASHKDTARTLEEGDDSIILSYHYGRKYE
EEEEECHHHHHHCCCCCEEEEEHHHCCCEEEECCCCCHHHHHHCCCCEEEEEEECCCCCC
PHPVDIKLKDGDLLSIGDVNLTVIHTPGHTQGSACLYYEDERIMFSGDTVFLNAYGRTDL
CCCEEEEECCCCEEEECCCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEEEECCCCCC
PTGDEEELIRSLERLARYEVRLGLPGHGKLIDDWKSNIYRILDHLEGL
CCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]