Click here to switch to the map view.

The map label for this gene is 18977632

Identifier: 18977632

GI number: 18977632

Start: 1193034

End: 1193948

Strand: Reverse

Name: 18977632

Synonym: PF1260

Alternate gene names: NA

Gene position: 1193948-1193034 (Counterclockwise)

Preceding gene: 18977633

Following gene: 18977631

Centisome position: 62.57

GC content: 38.03

Gene sequence:

>915_bases
ATGAGAAGTTTTCGATTTGGTCCGGGAATTATTTGTGTAAAAGGGGATAAGAACAAAATACTGAAGAAAACAAAGACAAC
TCCTCTCTCCCTTTCAGAGGCTCTTGCCAAAAGTGATGAGTTAGATACTATTATTGTTCTGAACACCCAAGAAGCAATAT
TAGTTAAGATGTATCCCTGGGTTGCTCTTCAAAATATAATTCACTACGTAGAGGATGCTGAGAGTAAAGGAATAATCATC
CTAATTAGAACTCCTAATCCTTCTAAAACCAGCGAGATTATTAAGGAGAGACTTAACGGAAAACTCCTAGATCCGATCGA
AGCAATATTAAATTCCTCCTACAACGAAACTATATTAATGCTAACGAGAAGGCCCATTACAAGGCCAATAAGGATAGAAG
ATGTGGAGGCTTCCCTACTACTTCCATACAACTTCCACCGCGTCTACGGAAGTATAATCCTTGAGATTCCATTAATTCTA
ATGGAGACATTAACAGAATGGAAGGAGATCATAATAAAGGTTTACGACACAGCAAGAAAATACCGAGAAAACATAGAGAG
GTTAATAATCGCAGTTGAAGACTTAGACCTTGGATTTATAGTAGGAGAAGGATGGGATTGGGATTACCCACGACCTCTCC
TTAAAGTCCCCGTATACAAGTTAAAATTATTCACCTGGGAAGATCCGAGGAGGATAAAATTCCTCCTTAAGGGATTGGAA
TACGTGGGTTACAGAAGACTGTGTGATATAGACGTAATAGTGGAGAATAAAAAGATAGAATGGATAGAACTAGGAAAATT
TAGATCAAAGTTTGATCTCGCAAGCAGGGCTAGAGAAGAGTTGGAAAGAAGCTTAAGCGAGGAAGCTTTGGAAAAGATAA
AGAGTATAGAAGAGAAGTTATTATCGAAAGGCTAA

Upstream 100 bases:

>100_bases
GTGAATTTTATAATAATTCCAGAGAAAAAAGTCGTTAAAATAAACTATCCCCCTGGGACAAATTTTGATAGAGGATACAG
AATTTTTAGGGGGCTATAAC

Downstream 100 bases:

>100_bases
AAATTTTAAGAGAAATAACACAACAAAAAGCGCTAATGGGGGATGAAAAGTGAATCCGGAAAACAAGATGATGTTAATGG
CATATGGGATATTTGCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRSFRFGPGIICVKGDKNKILKKTKTTPLSLSEALAKSDELDTIIVLNTQEAILVKMYPWVALQNIIHYVEDAESKGIII
LIRTPNPSKTSEIIKERLNGKLLDPIEAILNSSYNETILMLTRRPITRPIRIEDVEASLLLPYNFHRVYGSIILEIPLIL
METLTEWKEIIIKVYDTARKYRENIERLIIAVEDLDLGFIVGEGWDWDYPRPLLKVPVYKLKLFTWEDPRRIKFLLKGLE
YVGYRRLCDIDVIVENKKIEWIELGKFRSKFDLASRAREELERSLSEEALEKIKSIEEKLLSKG

Sequences:

>Translated_304_residues
MRSFRFGPGIICVKGDKNKILKKTKTTPLSLSEALAKSDELDTIIVLNTQEAILVKMYPWVALQNIIHYVEDAESKGIII
LIRTPNPSKTSEIIKERLNGKLLDPIEAILNSSYNETILMLTRRPITRPIRIEDVEASLLLPYNFHRVYGSIILEIPLIL
METLTEWKEIIIKVYDTARKYRENIERLIIAVEDLDLGFIVGEGWDWDYPRPLLKVPVYKLKLFTWEDPRRIKFLLKGLE
YVGYRRLCDIDVIVENKKIEWIELGKFRSKFDLASRAREELERSLSEEALEKIKSIEEKLLSKG
>Mature_304_residues
MRSFRFGPGIICVKGDKNKILKKTKTTPLSLSEALAKSDELDTIIVLNTQEAILVKMYPWVALQNIIHYVEDAESKGIII
LIRTPNPSKTSEIIKERLNGKLLDPIEAILNSSYNETILMLTRRPITRPIRIEDVEASLLLPYNFHRVYGSIILEIPLIL
METLTEWKEIIIKVYDTARKYRENIERLIIAVEDLDLGFIVGEGWDWDYPRPLLKVPVYKLKLFTWEDPRRIKFLLKGLE
YVGYRRLCDIDVIVENKKIEWIELGKFRSKFDLASRAREELERSLSEEALEKIKSIEEKLLSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35401; Mature: 35401

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFRFGPGIICVKGDKNKILKKTKTTPLSLSEALAKSDELDTIIVLNTQEAILVKMYPW
CCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEHHHH
VALQNIIHYVEDAESKGIIILIRTPNPSKTSEIIKERLNGKLLDPIEAILNSSYNETILM
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEE
LTRRPITRPIRIEDVEASLLLPYNFHRVYGSIILEIPLILMETLTEWKEIIIKVYDTARK
EECCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRENIERLIIAVEDLDLGFIVGEGWDWDYPRPLLKVPVYKLKLFTWEDPRRIKFLLKGLE
HHHHHHHHEEEEEECCEEEEEECCCCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHH
YVGYRRLCDIDVIVENKKIEWIELGKFRSKFDLASRAREELERSLSEEALEKIKSIEEKL
HHCHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKG
HHCC
>Mature Secondary Structure
MRSFRFGPGIICVKGDKNKILKKTKTTPLSLSEALAKSDELDTIIVLNTQEAILVKMYPW
CCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEHHHH
VALQNIIHYVEDAESKGIIILIRTPNPSKTSEIIKERLNGKLLDPIEAILNSSYNETILM
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEE
LTRRPITRPIRIEDVEASLLLPYNFHRVYGSIILEIPLILMETLTEWKEIIIKVYDTARK
EECCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRENIERLIIAVEDLDLGFIVGEGWDWDYPRPLLKVPVYKLKLFTWEDPRRIKFLLKGLE
HHHHHHHHEEEEEECCEEEEEECCCCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHH
YVGYRRLCDIDVIVENKKIEWIELGKFRSKFDLASRAREELERSLSEEALEKIKSIEEKL
HHCHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA