| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is sfsA
Identifier: 18977570
GI number: 18977570
Start: 1140762
End: 1141454
Strand: Reverse
Name: sfsA
Synonym: PF1198
Alternate gene names: 18977570
Gene position: 1141454-1140762 (Counterclockwise)
Preceding gene: 18977571
Following gene: 18977567
Centisome position: 59.82
GC content: 38.67
Gene sequence:
>693_bases ATGAAACTTATGGAAGTTTCTCCCCTTTTTCCTTGTATATTTTTAAGAAGAGTTAACCGATTTGTGGGATTGGTGAGAAT TAAGGAAAGAATTGAAAGAGCTCTTATCACAAATACTGGTAGACTAAATGAGTTCATGATCCCAGGGAGAATAGGCTATT GTACTCCAAAAGCGGGCGGTAAAACAAGGTACATTCTTCTTGGATTTGAAGATCATGGAAAGATAGCAATCATTGATACT AGACTTCAGGGAAAAGCATTTGAGAAAATAATTGAGAAGGAACTTCTTCCTGAACTGGAAGGTTGTAGAATAATAAAGAG AGAGCCAAGGGTTGGAGAATCCAGACTAGACTATTTGCTTGAATGTTCGAAAGGAGAGATATTCGTAGAAACTAAGAGTG CAGTTTTGAGGGAAGGGGAATATGCTATGTATCCAGATTGTCCATCAGTTAGAGGTCAAAGGCATATAAAAGAGCTAATA AAGTTGGCGAGAGATGGAAAAAGGGCCATGATTGTGTTTATAGGGGCCCTACCAAATGTAAGCAAATTTAAACCCTACAA GAAGGGAGATCCGAAAATTGCTGAATTGTTAAAGGAAGCTCTTGAGGCTGGAGTAGAAATTCGGGCGTTGGGACTTCACA TGGAGCTTAGTGGAGAAATAATATACAGAGGAGAGTTAGGAGTAGAAATCTAA
Upstream 100 bases:
>100_bases TTTTGAAGAAGCAATATGAATACATAATTCGCTATCCAGACATATACAAAGAAGAATTCTACGATCAGCTTATGAAAGAT ATAAACTTCAATTTCTGAAG
Downstream 100 bases:
>100_bases GATCTCTTTTTCCAATTTTGTGGCCTTTCTGATGTCATTAAATACTACTGCCCCAATTATCTTGCCGTTTTCATAGAAAA CTTTTGTGTTATCCTCAATC
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKLMEVSPLFPCIFLRRVNRFVGLVRIKERIERALITNTGRLNEFMIPGRIGYCTPKAGGKTRYILLGFEDHGKIAIIDT RLQGKAFEKIIEKELLPELEGCRIIKREPRVGESRLDYLLECSKGEIFVETKSAVLREGEYAMYPDCPSVRGQRHIKELI KLARDGKRAMIVFIGALPNVSKFKPYKKGDPKIAELLKEALEAGVEIRALGLHMELSGEIIYRGELGVEI
Sequences:
>Translated_230_residues MKLMEVSPLFPCIFLRRVNRFVGLVRIKERIERALITNTGRLNEFMIPGRIGYCTPKAGGKTRYILLGFEDHGKIAIIDT RLQGKAFEKIIEKELLPELEGCRIIKREPRVGESRLDYLLECSKGEIFVETKSAVLREGEYAMYPDCPSVRGQRHIKELI KLARDGKRAMIVFIGALPNVSKFKPYKKGDPKIAELLKEALEAGVEIRALGLHMELSGEIIYRGELGVEI >Mature_230_residues MKLMEVSPLFPCIFLRRVNRFVGLVRIKERIERALITNTGRLNEFMIPGRIGYCTPKAGGKTRYILLGFEDHGKIAIIDT RLQGKAFEKIIEKELLPELEGCRIIKREPRVGESRLDYLLECSKGEIFVETKSAVLREGEYAMYPDCPSVRGQRHIKELI KLARDGKRAMIVFIGALPNVSKFKPYKKGDPKIAELLKEALEAGVEIRALGLHMELSGEIIYRGELGVEI
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=224, Percent_Identity=31.6964285714286, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_PYRFU (Q8U1K8)
Other databases:
- EMBL: AE009950 - RefSeq: NP_578927.1 - ProteinModelPortal: Q8U1K8 - EnsemblBacteria: EBPYRT00000005070 - GeneID: 1469068 - GenomeReviews: AE009950_GR - KEGG: pfu:PF1198 - NMPDR: fig|186497.1.peg.1239 - GeneTree: EBGT00050000023555 - HOGENOM: HBG655520 - OMA: AMYPDCP - ProtClustDB: PRK00347 - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26114; Mature: 26114
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMEVSPLFPCIFLRRVNRFVGLVRIKERIERALITNTGRLNEFMIPGRIGYCTPKAGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCC KTRYILLGFEDHGKIAIIDTRLQGKAFEKIIEKELLPELEGCRIIKREPRVGESRLDYLL CEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH ECSKGEIFVETKSAVLREGEYAMYPDCPSVRGQRHIKELIKLARDGKRAMIVFIGALPNV CCCCCCEEEEEHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCH SKFKPYKKGDPKIAELLKEALEAGVEIRALGLHMELSGEIIYRGELGVEI HHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEECCCCCCC >Mature Secondary Structure MKLMEVSPLFPCIFLRRVNRFVGLVRIKERIERALITNTGRLNEFMIPGRIGYCTPKAGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCC KTRYILLGFEDHGKIAIIDTRLQGKAFEKIIEKELLPELEGCRIIKREPRVGESRLDYLL CEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH ECSKGEIFVETKSAVLREGEYAMYPDCPSVRGQRHIKELIKLARDGKRAMIVFIGALPNV CCCCCCEEEEEHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCH SKFKPYKKGDPKIAELLKEALEAGVEIRALGLHMELSGEIIYRGELGVEI HHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA