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The map label for this gene is dps

Identifier: 18977565

GI number: 18977565

Start: 1137512

End: 1138069

Strand: Reverse

Name: dps

Synonym: PF1193

Alternate gene names: 18977565

Gene position: 1138069-1137512 (Counterclockwise)

Preceding gene: 18977567

Following gene: 18977564

Centisome position: 59.64

GC content: 41.76

Gene sequence:

>558_bases
ATGCCAGAGCATAATAGGAGATTAGTTGAAAGGACAGGAATAGATGTAGAGAAGCTGTTGGAACTTCTCATTAAAGCGGC
TGCAGCAGAGTTCACAACGTATTATTACTACACTATACTTAGAAACCATGCAACAGGTCTGGAAGGAGAAGCAATTAAGG
AGATTATCGAAGATGCTAGACTTGAGGACAGAAACCATTTTGAAGCCCTCGTGCCAAGAATATACGAGCTTGGAGGAGAA
TTACCAAGGGATATTCGGGAATTTGCAGATCTAGCTTCTTGTAGAGATGCCTACCTACCAGAAGAGCCCACTATAGAGAA
CATTCTAAAAGTCCTACTCGAAGCTGAGAGATGTGCAGTTGGAGTCTATACAGAAATATGCAACTACACTTTTGGAAAGG
ATCCAAGGACTTATGATTTGGCCCTTGCCATATTACATGAAGAGATAGAGCATGAAGCATGGTTTGAAGAGCTCTTGACT
GGAAAGCCGAGTGGTCACTTTAGAAGAGGAAAGCCTGGGGAAAGTCCATATGTCTCAAAGTTTTTGAAAACTAGATAG

Upstream 100 bases:

>100_bases
TTAGGTTTTCCTTTTACTTTATAAGGCTTTTTAGTTAGAAGTTATTTCTAAACAGAAAAGTTTATTAAATAGAAATGTCT
ACTAAAATTTGTGATACCTT

Downstream 100 bases:

>100_bases
GTTTGCAATTTGCACCTTTTAATATTTTTTTACGAAACTTTTATAATCCTCACAAAGAAGAATTAAAGTGGTGATCTACA
TGCTCTCAATAAATCCAACC

Product: DNA protection protein DPS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MPEHNRRLVERTGIDVEKLLELLIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDARLEDRNHFEALVPRIYELGGE
LPRDIREFADLASCRDAYLPEEPTIENILKVLLEAERCAVGVYTEICNYTFGKDPRTYDLALAILHEEIEHEAWFEELLT
GKPSGHFRRGKPGESPYVSKFLKTR

Sequences:

>Translated_185_residues
MPEHNRRLVERTGIDVEKLLELLIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDARLEDRNHFEALVPRIYELGGE
LPRDIREFADLASCRDAYLPEEPTIENILKVLLEAERCAVGVYTEICNYTFGKDPRTYDLALAILHEEIEHEAWFEELLT
GKPSGHFRRGKPGESPYVSKFLKTR
>Mature_184_residues
PEHNRRLVERTGIDVEKLLELLIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDARLEDRNHFEALVPRIYELGGEL
PRDIREFADLASCRDAYLPEEPTIENILKVLLEAERCAVGVYTEICNYTFGKDPRTYDLALAILHEEIEHEAWFEELLTG
KPSGHFRRGKPGESPYVSKFLKTR

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. It ef

COG id: COG2406

COG function: function code R; Protein distantly related to bacterial ferritins

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DPS_PYRFU (Q8U1L3)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_578922.1
- ProteinModelPortal:   Q8U1L3
- SMR:   Q8U1L3
- EnsemblBacteria:   EBPYRT00000004725
- GeneID:   1469063
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1193
- NMPDR:   fig|186497.1.peg.1234
- GeneTree:   EBGT00050000023525
- HOGENOM:   HBG538256
- OMA:   GPSGHFL
- ProtClustDB:   PRK13456
- GO:   GO:0005737
- GO:   GO:0009295
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR014490
- Gene3D:   G3DSA:1.20.1260.10
- PIRSF:   PIRSF018063

Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 21358; Mature: 21226

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEHNRRLVERTGIDVEKLLELLIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDAR
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEDRNHFEALVPRIYELGGELPRDIREFADLASCRDAYLPEEPTIENILKVLLEAERCAV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GVYTEICNYTFGKDPRTYDLALAILHEEIEHEAWFEELLTGKPSGHFRRGKPGESPYVSK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FLKTR
HHHCC
>Mature Secondary Structure 
PEHNRRLVERTGIDVEKLLELLIKAAAAEFTTYYYYTILRNHATGLEGEAIKEIIEDAR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEDRNHFEALVPRIYELGGELPRDIREFADLASCRDAYLPEEPTIENILKVLLEAERCAV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GVYTEICNYTFGKDPRTYDLALAILHEEIEHEAWFEELLTGKPSGHFRRGKPGESPYVSK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FLKTR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA