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The map label for this gene is 18977459

Identifier: 18977459

GI number: 18977459

Start: 1036049

End: 1036387

Strand: Reverse

Name: 18977459

Synonym: PF1087

Alternate gene names: NA

Gene position: 1036387-1036049 (Counterclockwise)

Preceding gene: 18977460

Following gene: 18977458

Centisome position: 54.31

GC content: 45.43

Gene sequence:

>339_bases
ATGGCTGAGGACATTGAGGAGATTAGGAGAAGGAAGCTCATGGAATTGCAGAAGAAATACTTAGAGCAGCAAAAGGCTCA
AGAAGAAGCAGAGAGGCAACAGGCGTTAATTGAAGCTCAAATCCAGGCGATATTGAGGAGAATTCTAACTCCTGAGGCGA
GAGAAAGGTTGGCCAGAGTTAAGCTCGTGAAGCCTGAGCTTGCGAGGCAGGTTGAGCTTATACTTGTCCAGCTTTACCAG
GCAGGCCAGATAACCGAGAAGATAGACGATGCAAAAATGAAGAAGATTCTGGCCCAAATAGAGGCGAGAACAAGGAGAGA
ATTTAGAATTAAATGGTGA

Upstream 100 bases:

>100_bases
TGGCATGGAAGAAACCAGGAAATTCTTGAGTCACTTGAAGACAGTAATCGATGCAATACATTTTTAATTGTTGTTAACAA
TGTAGAGGTAGGTGAGAGAG

Downstream 100 bases:

>100_bases
ACCTTGATTTCCCTTTTTCGCCTATGATAAGGGAAATTATTATATGCAAAGGTCACAGAAACGTCAAGGCGACCCACCGC
TCCACTTTTGAGATAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAEDIEEIRRRKLMELQKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARVKLVKPELARQVELILVQLYQ
AGQITEKIDDAKMKKILAQIEARTRREFRIKW

Sequences:

>Translated_112_residues
MAEDIEEIRRRKLMELQKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARVKLVKPELARQVELILVQLYQ
AGQITEKIDDAKMKKILAQIEARTRREFRIKW
>Mature_111_residues
AEDIEEIRRRKLMELQKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARVKLVKPELARQVELILVQLYQA
GQITEKIDDAKMKKILAQIEARTRREFRIKW

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022889
- InterPro:   IPR002836 [H]

Pfam domain/function: PF01984 dsDNA_bind [H]

EC number: NA

Molecular weight: Translated: 13449; Mature: 13318

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDIEEIRRRKLMELQKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KLVKPELARQVELILVQLYQAGQITEKIDDAKMKKILAQIEARTRREFRIKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEDIEEIRRRKLMELQKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
KLVKPELARQVELILVQLYQAGQITEKIDDAKMKKILAQIEARTRREFRIKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]