Click here to switch to the map view.

The map label for this gene is yfiQ [C]

Identifier: 18977457

GI number: 18977457

Start: 1033957

End: 1035285

Strand: Direct

Name: yfiQ [C]

Synonym: PF1085

Alternate gene names: 18977457

Gene position: 1033957-1035285 (Clockwise)

Preceding gene: 18977454

Following gene: 33359539

Centisome position: 54.18

GC content: 45.3

Gene sequence:

>1329_bases
ATGAGGTACTTCTTTTACCCAAATAGTGTGGCCATATTTGGCTCATTCAGAGAGGGAGCAATAGCGAGGGAAATACTGAG
GAACATAGTTGAGGGAGGATTTGAGGGCAAGATAATTCCTGTGAATCCCAAAGGTGGAGAAGTAGAAGTGGCGGGTAAAA
AATTTAACATAAAAGAGAAGCTCGATGAGCCAGTTGATGTTTCAATAATAGCCATACCAGCAAAGCTCGTTCCAGAATTG
ATAAGGGGACTAAAAGGGCTTACAAAAGGAGCTGTAGTTATCTCCGCTGGATTCTCTGAGGTTGGAAATGTGGAGCTTGA
AAAAGAGCTAATAAAAGCTGCAAAAGAAGCTGGAATTAGGGTGATAGGGCCAAACTGTGCGGGGATCTTCGGGGTTCATG
CAAAGTTCTACGGTTCCTTTGAAGTCCGCGTTAATCCGGGAGGGCTAGCTCTGATAAGCCAAAGTGGAGCATTTGGAGGA
GCAGCATTGGCCATGGGGAATGAAGAAGGCATTGGATTTTCAGCCTTCGTTAGCTATGGGAACGCCGCTGACCTTGATGA
GAGTGATTTTCTAAGGTTCTTTGCCGACGATGAAAATACTAGGGTTATTGGTCTCTACATTGAAGGAGTAAAGGATGGAA
GAAAGTTCCTGGATGCACTCCGTTATGCAGCGTCAAAAAAGCCCGTCATAATCCTTAAAGCGGGAAAAAGTAGGGCCGGA
GCGAGGGCTGCCGCATCTCACACAGGCTCCCTTGCTGGAAGTTACGAAATATACAGGGCTGCATTCAGGCAGGCTGGGGC
AATAGAAGTTGAGGAGATGGAAGAGCTTTTCGATGCAGCTAAGGCCTTTGAGATGTACGAAAGAGCTGGAAGGAGAGTGG
CAATTATAACCAATTCAGGTGGCCCAGGAGTTTTGGCTACTGACAAGCTTGAGAGATTGGGGTTAGAAATTGCCAAGCTG
ACTGAAGAAACAGTGGAGGAATTAAGGAGTTTTTTGCCTCCCCAGTGCTCAGTAAAGAATCCAGTTGATTTGATAGCGGA
TGCAGACTATGAAAGGTATAAGAGGGCCATTGAAGTTGTGTGTAGGGATGAGAATGTGGATGCCATTCTGGTGATATGCG
TTCCACCAATATTCATACCCAGCGAGGAGATAGCAAGAGCTGTTGTCGAGGCAAATTGTGATAAGCCAATAATAGTAAAC
TTCATGGCTGGGGAGTTAGTAAGGGAGGGAATAAAAATTTTAGAAAGCAAAAAAATAAAGAACTTCCCAACTCCAGAGAG
GGCAGCAAAAGCTTTGTATTGGCTCAGCCTAAGGTCTAGTAGCGAATGA

Upstream 100 bases:

>100_bases
GTGAAGCCTATCGAAAGTTCCACCAACGACAACTTTTTTGTACTTCTTTTTCATCGCTACCCTTTTATCTTGATTAAATA
AAAACTTCTCGGGGGTTGAA

Downstream 100 bases:

>100_bases
ACTTGTTGACGCTGGTTATCATTACCTTTGCTTTTTCATATTCCACTGCCACTTCGTTTGGTGGCCCCACTGGTTGGGCT
ACTTCTTGCTCTTCCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MRYFFYPNSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGEVEVAGKKFNIKEKLDEPVDVSIIAIPAKLVPEL
IRGLKGLTKGAVVISAGFSEVGNVELEKELIKAAKEAGIRVIGPNCAGIFGVHAKFYGSFEVRVNPGGLALISQSGAFGG
AALAMGNEEGIGFSAFVSYGNAADLDESDFLRFFADDENTRVIGLYIEGVKDGRKFLDALRYAASKKPVIILKAGKSRAG
ARAAASHTGSLAGSYEIYRAAFRQAGAIEVEEMEELFDAAKAFEMYERAGRRVAIITNSGGPGVLATDKLERLGLEIAKL
TEETVEELRSFLPPQCSVKNPVDLIADADYERYKRAIEVVCRDENVDAILVICVPPIFIPSEEIARAVVEANCDKPIIVN
FMAGELVREGIKILESKKIKNFPTPERAAKALYWLSLRSSSE

Sequences:

>Translated_442_residues
MRYFFYPNSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGEVEVAGKKFNIKEKLDEPVDVSIIAIPAKLVPEL
IRGLKGLTKGAVVISAGFSEVGNVELEKELIKAAKEAGIRVIGPNCAGIFGVHAKFYGSFEVRVNPGGLALISQSGAFGG
AALAMGNEEGIGFSAFVSYGNAADLDESDFLRFFADDENTRVIGLYIEGVKDGRKFLDALRYAASKKPVIILKAGKSRAG
ARAAASHTGSLAGSYEIYRAAFRQAGAIEVEEMEELFDAAKAFEMYERAGRRVAIITNSGGPGVLATDKLERLGLEIAKL
TEETVEELRSFLPPQCSVKNPVDLIADADYERYKRAIEVVCRDENVDAILVICVPPIFIPSEEIARAVVEANCDKPIIVN
FMAGELVREGIKILESKKIKNFPTPERAAKALYWLSLRSSSE
>Mature_442_residues
MRYFFYPNSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGEVEVAGKKFNIKEKLDEPVDVSIIAIPAKLVPEL
IRGLKGLTKGAVVISAGFSEVGNVELEKELIKAAKEAGIRVIGPNCAGIFGVHAKFYGSFEVRVNPGGLALISQSGAFGG
AALAMGNEEGIGFSAFVSYGNAADLDESDFLRFFADDENTRVIGLYIEGVKDGRKFLDALRYAASKKPVIILKAGKSRAG
ARAAASHTGSLAGSYEIYRAAFRQAGAIEVEEMEELFDAAKAFEMYERAGRRVAIITNSGGPGVLATDKLERLGLEIAKL
TEETVEELRSFLPPQCSVKNPVDLIADADYERYKRAIEVVCRDENVDAILVICVPPIFIPSEEIARAVVEANCDKPIIVN
FMAGELVREGIKILESKKIKNFPTPERAAKALYWLSLRSSSE

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=443, Percent_Identity=29.5711060948081, Blast_Score=188, Evalue=7e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 47863; Mature: 47863

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFFYPNSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGEVEVAGKKFNIKEK
CEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCEECCHHH
LDEPVDVSIIAIPAKLVPELIRGLKGLTKGAVVISAGFSEVGNVELEKELIKAAKEAGIR
CCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCE
VIGPNCAGIFGVHAKFYGSFEVRVNPGGLALISQSGAFGGAALAMGNEEGIGFSAFVSYG
EECCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCHHHHEECC
NAADLDESDFLRFFADDENTRVIGLYIEGVKDGRKFLDALRYAASKKPVIILKAGKSRAG
CCCCCCHHHCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
ARAAASHTGSLAGSYEIYRAAFRQAGAIEVEEMEELFDAAKAFEMYERAGRRVAIITNSG
CHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GPGVLATDKLERLGLEIAKLTEETVEELRSFLPPQCSVKNPVDLIADADYERYKRAIEVV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCHHHHHHHHHHE
CRDENVDAILVICVPPIFIPSEEIARAVVEANCDKPIIVNFMAGELVREGIKILESKKIK
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC
NFPTPERAAKALYWLSLRSSSE
CCCCHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MRYFFYPNSVAIFGSFREGAIAREILRNIVEGGFEGKIIPVNPKGGEVEVAGKKFNIKEK
CEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCEECCHHH
LDEPVDVSIIAIPAKLVPELIRGLKGLTKGAVVISAGFSEVGNVELEKELIKAAKEAGIR
CCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCE
VIGPNCAGIFGVHAKFYGSFEVRVNPGGLALISQSGAFGGAALAMGNEEGIGFSAFVSYG
EECCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCHHHHEECC
NAADLDESDFLRFFADDENTRVIGLYIEGVKDGRKFLDALRYAASKKPVIILKAGKSRAG
CCCCCCHHHCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
ARAAASHTGSLAGSYEIYRAAFRQAGAIEVEEMEELFDAAKAFEMYERAGRRVAIITNSG
CHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GPGVLATDKLERLGLEIAKLTEETVEELRSFLPPQCSVKNPVDLIADADYERYKRAIEVV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCHHHHHHHHHHE
CRDENVDAILVICVPPIFIPSEEIARAVVEANCDKPIIVNFMAGELVREGIKILESKKIK
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC
NFPTPERAAKALYWLSLRSSSE
CCCCHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]