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The map label for this gene is rps8e [H]

Identifier: 18977441

GI number: 18977441

Start: 1020469

End: 1020852

Strand: Direct

Name: rps8e [H]

Synonym: PF1069

Alternate gene names: 18977441

Gene position: 1020469-1020852 (Clockwise)

Preceding gene: 18977440

Following gene: 18977442

Centisome position: 53.48

GC content: 47.14

Gene sequence:

>384_bases
ATGGCGATTTGGCAGGGAAGATCACTTAAGAAGCCCTCAGGTGGAAGGATTGTCCTCGCGAGGAAGAAGAGGAAAAGGGA
GCTTGGAAGGGAACCCTCCAACACAAGAGTAGCTGAGCAAGACAAGAGAAAGATCATAAGAACTTACGGTGGCAACAGGA
AGGTTAGATTAACAGCCGCTGCATATGCAAACGTATTTGACAAGAGTGGGAAGGGTAGAAAGGTTAGAATCATAAGGGTC
ATCGAGAATCCAGCAAATAGGCAGTTCGCAAGAAGAAACATAATAACCAAGGGAGCCATCATTGAGACTGAGATTGGAAA
GGCAAAGGTTACCTCCAGACCTGGGCAAGACGGCGTTGTAAATGCCATCCTCCTCGAAGAGTGA

Upstream 100 bases:

>100_bases
TTATTTACGGCATTCACAAAGTTCATTAATATGGAATATTAAGCTCACGAAAAAACTTATAAATTACTTCCTTTAATGCC
CAATAGCGAGGTGGGATTAA

Downstream 100 bases:

>100_bases
TTTTTCTTTTTCCACCCTTATTATCCCTCAACATTACTTAAGGGCCATTTTGAAAGTTGTTTCTTCATCGAGCGTTGAAG
TTTGTGGCTTTCTATTTGGT

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAIWQGRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANVFDKSGKGRKVRIIRV
IENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVVNAILLEE

Sequences:

>Translated_127_residues
MAIWQGRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANVFDKSGKGRKVRIIRV
IENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVVNAILLEE
>Mature_126_residues
AIWQGRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANVFDKSGKGRKVRIIRVI
ENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVVNAILLEE

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283 [H]

Pfam domain/function: PF01201 Ribosomal_S8e [H]

EC number: NA

Molecular weight: Translated: 14262; Mature: 14131

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIWQGRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAA
CCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHH
AYANVFDKSGKGRKVRIIRVIENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVV
HHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCEEEECCCCEEECCCCCCCCCE
NAILLEE
EEEEECC
>Mature Secondary Structure 
AIWQGRSLKKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAA
CCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHH
AYANVFDKSGKGRKVRIIRVIENPANRQFARRNIITKGAIIETEIGKAKVTSRPGQDGVV
HHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCEEEECCCCEEECCCCCCCCCE
NAILLEE
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]