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The map label for this gene is 18977413

Identifier: 18977413

GI number: 18977413

Start: 993579

End: 995435

Strand: Reverse

Name: 18977413

Synonym: PF1041

Alternate gene names: NA

Gene position: 995435-993579 (Counterclockwise)

Preceding gene: 18977416

Following gene: 18977410

Centisome position: 52.16

GC content: 42.22

Gene sequence:

>1857_bases
ATGCATATAAAGAGAATTAAGAGATGCGAGATAAGGAAGGTGAGCGAGATGAAGGTCTTAGTTCCAGACACTAGCGTGAT
AGTAGATGGGAGATTGACCCAATACTTGGAGAGATTGAAAGAAAAGGTAAAGGTAGTGGTTCCTGAGGCTGTAGTAGCTG
AAATAGAGCATCAAGCTAATGCGGGAAAGGCAATAGGGCATACAGGACTAGAAGAGTTGAAGAAACTTAGAGAGATAGCT
AATGAAGGAAAAATACTTCTGGAATTCTACGGAGAGAGACCAGATTTGTGGCAAATAAGAAGGGCGAAGTCTGGAGAAAT
TGATAACATGGTAAGGGAGGTTGCCAGAGAACTTAACGGAGTTCTAGTAACTGGTGATCAAATTCAGAGAGACATCGCCA
TAGCAAAGGGTATTGATGTAATCTACCTCGAAGCTAAAAGAGAGCCAAGAATGAGACTCGAAGATTTCTTTGACGAGGAA
ACCATGAGCGTTCACTTAAAAGCAGGAATAAAACCCCTGGCAAAGAAGGGAAGACCAGGGAATTGGAAATTAGTGCCAAT
AAGAGACGAGCCTCTCAGTGAGGACGAACTGGAGGAAATAGCTGATGATATTGTAGAGAGAGCTAGAAGAGATCCCGAAA
GTTTCATTGAGCTTGATGAACCTGGTGCTACGGTAGTCCAACTAAGGAACTATAGAATTGTAATAGCGAGGCCTCCCTTC
TCTGATAGAATAGAGATAACTGCCGTGAGACCAATTAAGAAGCTTAGTATAGAGGATTACCAGCTAAGTGAAAAGCTCTT
GGAGAGGCTTAGGGAAAGAGCTGAGGGAATACTAGTAGCAGGACCTCCTGGAGCTGGAAAAACAACATTTGTTCAAGCAT
TGGCAGAGTGGTATGCATCCATGGGTAAGATAGTTAAGACTATGGAAAAGCCCAGGGATTTGAATGTCTCTGAAGAAATT
ACTCAGTACACAGCTCTGGGAGGAAGTATGGAGAAGACTGGAGACGTTCTTCTCTTAGTAAGGCCTGATTATACAATTTT
TGATGAAATGAGGAAGACCAGCGATTTCCTTATTTACGCCGATCTAAGACTTGCCGGGGTAGGGATGGTAGGAGTAGTGC
ATGCTACCAAGCCTATAGATGCTATTCAAAGATTCATCGGAAGAGTAGAGCTTGGAATGATACCTCAAATAGTGGATACT
GTGATCTTTATCAAAGATGGAAGAGTTGCCAAGGTTCTAACACTCGAATACAAAGTCAAAGTCCCCACTGGAATGAAAGA
AGAGGACTTAGCAAGGCCTGTAATTGAGGTTAGGGACTTCGAAACGGGCCAACTAGAATACGAGATTTATACGTTCGGAG
AAGAAGTAAGCGTCGTCCCAATAAAGAAAGAAGAAAAGGCTCCAGCGCTAAAGTTGGCTGAGAAAAAGCTCAAACAGGAA
ATCCAGAGGTTTTTACCAGATGTATACACTGAAGTAGAAGTCGTAAGCCCTCACAAGGCAGTTATATACGCTGACGAATT
CGATATACCTTTGATTATTGGGAAGAAAGGAAAAAGGATACAAGAGCTTGAAAATAGGCTCGGAATTAGCATTGATGTAA
AGAGTTTTTCAGAGAAAGCTCCAGAGAAGCCTGGGGAAAAAATCCCAGTAGAAGTTGAGGAGAAAAAGAAGAGTATAGTA
CTAAGAGTGTCCCCAGACTATGCCAGAAGACCTTTAAGGTTTTATGCAGATAATGAATATATATTCACAGCTACTCCAAG
CAAGAAAGGGGTAGTCAAAGTCGGAAAGAATTCTCCTGTTGGCAAGCTCCTTAAGAGGTATCTTGACGAAGGTCATCAGA
TTTGGGCTTCCTACTGA

Upstream 100 bases:

>100_bases
GCTTCTTCTTCCATATTTTTTAGCTCTTTAATTATTTCAATGAGCTTCATTTTTCATCACCAAATTTTAATAACTTTTAG
TGCTTAAAAATTTTAGGTAA

Downstream 100 bases:

>100_bases
GGAATGCCCACACTATTTCTTCAATTTTTTCTGAAGGATCTTTGTCAAAGAAGAATAAATTCCCAGGAACAGAGAGGTCG
GAAGAACCGAAGCCTTTAAC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MHIKRIKRCEIRKVSEMKVLVPDTSVIVDGRLTQYLERLKEKVKVVVPEAVVAEIEHQANAGKAIGHTGLEELKKLREIA
NEGKILLEFYGERPDLWQIRRAKSGEIDNMVREVARELNGVLVTGDQIQRDIAIAKGIDVIYLEAKREPRMRLEDFFDEE
TMSVHLKAGIKPLAKKGRPGNWKLVPIRDEPLSEDELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIARPPF
SDRIEITAVRPIKKLSIEDYQLSEKLLERLRERAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLNVSEEI
TQYTALGGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDT
VIFIKDGRVAKVLTLEYKVKVPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKKLKQE
IQRFLPDVYTEVEVVSPHKAVIYADEFDIPLIIGKKGKRIQELENRLGISIDVKSFSEKAPEKPGEKIPVEVEEKKKSIV
LRVSPDYARRPLRFYADNEYIFTATPSKKGVVKVGKNSPVGKLLKRYLDEGHQIWASY

Sequences:

>Translated_618_residues
MHIKRIKRCEIRKVSEMKVLVPDTSVIVDGRLTQYLERLKEKVKVVVPEAVVAEIEHQANAGKAIGHTGLEELKKLREIA
NEGKILLEFYGERPDLWQIRRAKSGEIDNMVREVARELNGVLVTGDQIQRDIAIAKGIDVIYLEAKREPRMRLEDFFDEE
TMSVHLKAGIKPLAKKGRPGNWKLVPIRDEPLSEDELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIARPPF
SDRIEITAVRPIKKLSIEDYQLSEKLLERLRERAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLNVSEEI
TQYTALGGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDT
VIFIKDGRVAKVLTLEYKVKVPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKKLKQE
IQRFLPDVYTEVEVVSPHKAVIYADEFDIPLIIGKKGKRIQELENRLGISIDVKSFSEKAPEKPGEKIPVEVEEKKKSIV
LRVSPDYARRPLRFYADNEYIFTATPSKKGVVKVGKNSPVGKLLKRYLDEGHQIWASY
>Mature_618_residues
MHIKRIKRCEIRKVSEMKVLVPDTSVIVDGRLTQYLERLKEKVKVVVPEAVVAEIEHQANAGKAIGHTGLEELKKLREIA
NEGKILLEFYGERPDLWQIRRAKSGEIDNMVREVARELNGVLVTGDQIQRDIAIAKGIDVIYLEAKREPRMRLEDFFDEE
TMSVHLKAGIKPLAKKGRPGNWKLVPIRDEPLSEDELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIARPPF
SDRIEITAVRPIKKLSIEDYQLSEKLLERLRERAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLNVSEEI
TQYTALGGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDT
VIFIKDGRVAKVLTLEYKVKVPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKKLKQE
IQRFLPDVYTEVEVVSPHKAVIYADEFDIPLIIGKKGKRIQELENRLGISIDVKSFSEKAPEKPGEKIPVEVEEKKKSIV
LRVSPDYARRPLRFYADNEYIFTATPSKKGVVKVGKNSPVGKLLKRYLDEGHQIWASY

Specific function: Unknown

COG id: COG1855

COG function: function code R; ATPase (PilT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004087
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 70212; Mature: 70212

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIKRIKRCEIRKVSEMKVLVPDTSVIVDGRLTQYLERLKEKVKVVVPEAVVAEIEHQAN
CCCCHHHHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHEEECCHHHHHHHHHHCC
AGKAIGHTGLEELKKLREIANEGKILLEFYGERPDLWQIRRAKSGEIDNMVREVARELNG
CCCHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
VLVTGDQIQRDIAIAKGIDVIYLEAKREPRMRLEDFFDEETMSVHLKAGIKPLAKKGRPG
EEEECHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCHHHHHCCCCC
NWKLVPIRDEPLSEDELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIARPPF
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCC
SDRIEITAVRPIKKLSIEDYQLSEKLLERLRERAEGILVAGPPGAGKTTFVQALAEWYAS
CCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHH
MGKIVKTMEKPRDLNVSEEITQYTALGGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEE
DLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKDGRVAKVLTLEYKVK
ECEEECCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHCEEEEEECCCEEEEEEEEEEEE
VPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKKLKQE
CCCCCCHHHHHCCHHHCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH
IQRFLPDVYTEVEVVSPHKAVIYADEFDIPLIIGKKGKRIQELENRLGISIDVKSFSEKA
HHHHHHHHHCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCEEEECHHHHHC
PEKPGEKIPVEVEEKKKSIVLRVSPDYARRPLRFYADNEYIFTATPSKKGVVKVGKNSPV
CCCCCCCCCEEEECCCCEEEEEECCHHHCCCEEEEECCCEEEEECCCCCCEEEECCCCCH
GKLLKRYLDEGHQIWASY
HHHHHHHHCCCHHEECCC
>Mature Secondary Structure
MHIKRIKRCEIRKVSEMKVLVPDTSVIVDGRLTQYLERLKEKVKVVVPEAVVAEIEHQAN
CCCCHHHHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHHHHHEEECCHHHHHHHHHHCC
AGKAIGHTGLEELKKLREIANEGKILLEFYGERPDLWQIRRAKSGEIDNMVREVARELNG
CCCHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
VLVTGDQIQRDIAIAKGIDVIYLEAKREPRMRLEDFFDEETMSVHLKAGIKPLAKKGRPG
EEEECHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCHHHHHCCCCC
NWKLVPIRDEPLSEDELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIARPPF
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCC
SDRIEITAVRPIKKLSIEDYQLSEKLLERLRERAEGILVAGPPGAGKTTFVQALAEWYAS
CCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHH
MGKIVKTMEKPRDLNVSEEITQYTALGGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEE
DLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKDGRVAKVLTLEYKVK
ECEEECCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHCEEEEEECCCEEEEEEEEEEEE
VPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKKLKQE
CCCCCCHHHHHCCHHHCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH
IQRFLPDVYTEVEVVSPHKAVIYADEFDIPLIIGKKGKRIQELENRLGISIDVKSFSEKA
HHHHHHHHHCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCEEEECHHHHHC
PEKPGEKIPVEVEEKKKSIVLRVSPDYARRPLRFYADNEYIFTATPSKKGVVKVGKNSPV
CCCCCCCCCEEEECCCCEEEEEECCHHHCCCEEEEECCCEEEEECCCCCCEEEECCCCCH
GKLLKRYLDEGHQIWASY
HHHHHHHHCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]