| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977332
Identifier: 18977332
GI number: 18977332
Start: 920401
End: 920739
Strand: Reverse
Name: 18977332
Synonym: PF0960
Alternate gene names: NA
Gene position: 920739-920401 (Counterclockwise)
Preceding gene: 18977333
Following gene: 18977331
Centisome position: 48.25
GC content: 41.3
Gene sequence:
>339_bases ATGGGATCGGGGAAGACCTTATTGATTATTATGCTCTTGTTGACCACTAACTTAACCTTTGAAGAGAACATTAAGAATAT TGCTAAAATCATTGGGAAGGCTGAAAAGGTGAGGAAGGCTAAAGATCAGCTCATAAAGGCGATAATGGAGTTTAAGGAGT ATTGGGAAACCTACGGTAAGCGGGATTATGCGGTTGATAAGGCGAAGAAGGCGAGGAAGGTTTTTGACCTTGAGAAGGCA ACACTCAAGCAGTTGGAGTTATGGTTGAGACATCCTGAACGCTACGACATTAAGCAAATTGACTACCCAGGTCAAAAGAG AAAGCGGAAGAAAAATTAA
Upstream 100 bases:
>100_bases AGCTTTAAAAACTTTACGCTCAACTTTTTAAATGACTTCAGAAGTTAAATATGAGGAATACGAAAGAAAAAGTTGGCTCA ACGAGTAGCGAAGAGGAAGT
Downstream 100 bases:
>100_bases TAATCATGCACTCTAAACTTTTTAAGGTGTGAAGGATGGCCGTAAAAACAAAGTCAAAGGATGTGTTTGAGGTAAAAATC CCGGTCCCCGAGGGGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MGSGKTLLIIMLLLTTNLTFEENIKNIAKIIGKAEKVRKAKDQLIKAIMEFKEYWETYGKRDYAVDKAKKARKVFDLEKA TLKQLELWLRHPERYDIKQIDYPGQKRKRKKN
Sequences:
>Translated_112_residues MGSGKTLLIIMLLLTTNLTFEENIKNIAKIIGKAEKVRKAKDQLIKAIMEFKEYWETYGKRDYAVDKAKKARKVFDLEKA TLKQLELWLRHPERYDIKQIDYPGQKRKRKKN >Mature_111_residues GSGKTLLIIMLLLTTNLTFEENIKNIAKIIGKAEKVRKAKDQLIKAIMEFKEYWETYGKRDYAVDKAKKARKVFDLEKAT LKQLELWLRHPERYDIKQIDYPGQKRKRKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13314; Mature: 13183
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGKTLLIIMLLLTTNLTFEENIKNIAKIIGKAEKVRKAKDQLIKAIMEFKEYWETYGK CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDYAVDKAKKARKVFDLEKATLKQLELWLRHPERYDIKQIDYPGQKRKRKKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure GSGKTLLIIMLLLTTNLTFEENIKNIAKIIGKAEKVRKAKDQLIKAIMEFKEYWETYGK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDYAVDKAKKARKVFDLEKATLKQLELWLRHPERYDIKQIDYPGQKRKRKKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA