| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977316
Identifier: 18977316
GI number: 18977316
Start: 909057
End: 909425
Strand: Direct
Name: 18977316
Synonym: PF0944
Alternate gene names: NA
Gene position: 909057-909425 (Clockwise)
Preceding gene: 18977315
Following gene: 18977318
Centisome position: 47.64
GC content: 38.75
Gene sequence:
>369_bases ATGAATTCGAGAGAAAAGTTGATCAAAGAACTTATTGAAAGAGGGAGAAAGCAGTATCTCATGATAAAAAACTATCATCT CTACCTACCATCAATAAAGAAAGCTTGTGAGAAAATTTTTGGTAACTGTGAAGTCTATGTATTTGGAAGTGTATTGACGG GGAAGTTCACGGCAGGAAGTGACGTTGATCTGCTGATAAAAGTTCCTAACCCTCCAAAAAGCTTACGGGCGAAGGCTGAA GTTGAGGCTAAGATAGAGGAACTCGCAGGTTTGCCGGACTATCATCCGTTTGAGTTTCACATAGTTGATGAGGAAGGCTT CAAATGGTATGTGGAAAAGCTAAAAATAAAGTTAAAAAGAGTAAGCTAG
Upstream 100 bases:
>100_bases ATTGACGCCAGATACGAGCCAAAGCTATATTCTCGGAAGGATGCTGAAGACATTATCTACTTTGTTAAGCAGGTAATGAC CTTTGTGGAGGAGCTTGAAG
Downstream 100 bases:
>100_bases CTACTTCTTTGCAATCCACAAGAGAAAGACTCCAGCTAATATAAATGCCATTAAACTTCCCGAATAAGGTAGTGTCGGAT GTATACTGGCCAGAGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Superfamily Hydrolase; Nucleotidyltransferase Of DNA Polymerase Beta Family; Nucleotidyltransferase
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNSREKLIKELIERGRKQYLMIKNYHLYLPSIKKACEKIFGNCEVYVFGSVLTGKFTAGSDVDLLIKVPNPPKSLRAKAE VEAKIEELAGLPDYHPFEFHIVDEEGFKWYVEKLKIKLKRVS
Sequences:
>Translated_122_residues MNSREKLIKELIERGRKQYLMIKNYHLYLPSIKKACEKIFGNCEVYVFGSVLTGKFTAGSDVDLLIKVPNPPKSLRAKAE VEAKIEELAGLPDYHPFEFHIVDEEGFKWYVEKLKIKLKRVS >Mature_122_residues MNSREKLIKELIERGRKQYLMIKNYHLYLPSIKKACEKIFGNCEVYVFGSVLTGKFTAGSDVDLLIKVPNPPKSLRAKAE VEAKIEELAGLPDYHPFEFHIVDEEGFKWYVEKLKIKLKRVS
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14145; Mature: 14145
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSREKLIKELIERGRKQYLMIKNYHLYLPSIKKACEKIFGNCEVYVFGSVLTGKFTAGS CCCHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHCCCEEEEEECEEECCCCCCC DVDLLIKVPNPPKSLRAKAEVEAKIEELAGLPDYHPFEFHIVDEEGFKWYVEKLKIKLKR CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEE VS CC >Mature Secondary Structure MNSREKLIKELIERGRKQYLMIKNYHLYLPSIKKACEKIFGNCEVYVFGSVLTGKFTAGS CCCHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHCCCEEEEEECEEECCCCCCC DVDLLIKVPNPPKSLRAKAEVEAKIEELAGLPDYHPFEFHIVDEEGFKWYVEKLKIKLKR CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEE VS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA