Click here to switch to the map view.

The map label for this gene is 18977268

Identifier: 18977268

GI number: 18977268

Start: 868425

End: 868853

Strand: Reverse

Name: 18977268

Synonym: PF0896

Alternate gene names: NA

Gene position: 868853-868425 (Counterclockwise)

Preceding gene: 18977269

Following gene: 18977267

Centisome position: 45.53

GC content: 34.27

Gene sequence:

>429_bases
ATGTCTAGGCAATTTTTAAATTTCATAAAAATGGTAAGCATATATGTAGGATTTCTTGTAGCTCTAGTACTTTGGATTAG
TTTTCTTATAGGTAAAATAACAGGGGAATTCACTAATTGCTATATGAAATCTATAGTGAAAAATGTAGTGTTGCCACTAG
TTGGAGCGGTATATGTTCATGAAGTTCTTCAATATCTTCCCCTAATGACACCTGTAAAAGTAACTATAGATTTCAAGAAA
TTAATGTTTGTGTGGGAACCGACAGTGGAAGTTAGTTCAATTAGAAAGTTGTGTGGCTGGATTCTTGGATTCATAGCTCC
CTTCATTATAGGAATAATATTGGTTAGCAAAGGAAATGGTATTGCTGCAATCCCCCTCCTTTTAGTATCTATTTCTGGAA
TAATAGGAATTTGGGAGGGATGGGAATGA

Upstream 100 bases:

>100_bases
ATTATAAGGAAAATTATTCCTATGTGGGTAATTCCCTTGTTAATTCTTATCTCTCCACTTGCATATTTTGTGAGGATAAA
GCTAGAAAGGGTGATAAGAA

Downstream 100 bases:

>100_bases
AACTTGAGATTAGAGATCTTAGTGTTGGTTATGATAAACCAGTTCTCGAAAGAATAACAATGACCATAGAGAAAGGTAAT
GTCGTGAACTTCCACGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSRQFLNFIKMVSIYVGFLVALVLWISFLIGKITGEFTNCYMKSIVKNVVLPLVGAVYVHEVLQYLPLMTPVKVTIDFKK
LMFVWEPTVEVSSIRKLCGWILGFIAPFIIGIILVSKGNGIAAIPLLLVSISGIIGIWEGWE

Sequences:

>Translated_142_residues
MSRQFLNFIKMVSIYVGFLVALVLWISFLIGKITGEFTNCYMKSIVKNVVLPLVGAVYVHEVLQYLPLMTPVKVTIDFKK
LMFVWEPTVEVSSIRKLCGWILGFIAPFIIGIILVSKGNGIAAIPLLLVSISGIIGIWEGWE
>Mature_141_residues
SRQFLNFIKMVSIYVGFLVALVLWISFLIGKITGEFTNCYMKSIVKNVVLPLVGAVYVHEVLQYLPLMTPVKVTIDFKKL
MFVWEPTVEVSSIRKLCGWILGFIAPFIIGIILVSKGNGIAAIPLLLVSISGIIGIWEGWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15878; Mature: 15746

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQFLNFIKMVSIYVGFLVALVLWISFLIGKITGEFTNCYMKSIVKNVVLPLVGAVYVH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLQYLPLMTPVKVTIDFKKLMFVWEPTVEVSSIRKLCGWILGFIAPFIIGIILVSKGNG
HHHHHHCCCCCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAAIPLLLVSISGIIGIWEGWE
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRQFLNFIKMVSIYVGFLVALVLWISFLIGKITGEFTNCYMKSIVKNVVLPLVGAVYVH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLQYLPLMTPVKVTIDFKKLMFVWEPTVEVSSIRKLCGWILGFIAPFIIGIILVSKGNG
HHHHHHCCCCCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAAIPLLLVSISGIIGIWEGWE
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA