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The map label for this gene is rpl15e [H]

Identifier: 18977248

GI number: 18977248

Start: 848995

End: 849579

Strand: Reverse

Name: rpl15e [H]

Synonym: PF0876

Alternate gene names: 18977248

Gene position: 849579-848995 (Counterclockwise)

Preceding gene: 18977249

Following gene: 18977245

Centisome position: 44.52

GC content: 45.81

Gene sequence:

>585_bases
ATGGGAATGTATAAGTATATTAGGGAAGCTTGGAAGAGCCCAAAGAAGAGCTATGTAGGAGAATTATTGAAGCAGAGAAT
GATAAAGTGGAGAAGAGAGCCTGTAGTTGTTAGGATCGAGAGGCCAACGAGACTTGATAGGGCTAGGGCCTTGGGATACC
AGGCAAAGCAGGGTTACGTTATCGTTAGAGTTAGGGTTAGAAAGGGTGGAAGGAAAAGGCCCAGGTGGAAGGGTGGAAGG
AAGCCAAGCAAGATGGGTCAAGTTAAGTACTCACCAAAGAAGTCCTTGCAATGGATTGCTGAAGAAAAAGCTGCAAGAAA
GTTCCCCAACCTTGAGGTTCTCAATAGCTATTGGGTTGGAGAAGATGGAATGTACAAGTGGTTTGAAGTAATTATGGTTG
ACCCACACCACCCAGTTATCAAGTCCGATCCTAAGATAGCATGGATAGCCCTCAAGCACCACAAGGGTAGAGTATTCAGA
GGTCTCACATCAGCTGGAAAGAAGGGTAGAGGACTTAGAAACAAGGGTAAGGGTGCAGAGAAGGTTAGGCCAAGCATTAG
AGCTAACGAGGGTAAGGGTAAGTAG

Upstream 100 bases:

>100_bases
GCAATGCTTAAAAACTCACCTTCCAACATCCACCGACTTGGCGGGGTAAACCCGCGGGATGTCCCCGGATGGGGGAACCA
CAAACTAGGGAGGGAGAGCA

Downstream 100 bases:

>100_bases
GCTTAGTTGCAAAAACTCCGAGTGCTTTTTCTACCCTTTTAACATTTGTAAACCCTACTTTTCTAAGCCTTTCCATAACT
CCCCTCTGAAGGTCTTTTTC

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKGGR
KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFR
GLTSAGKKGRGLRNKGKGAEKVRPSIRANEGKGK

Sequences:

>Translated_194_residues
MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKGGR
KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFR
GLTSAGKKGRGLRNKGKGAEKVRPSIRANEGKGK
>Mature_193_residues
GMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKGGRK
PSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRG
LTSAGKKGRGLRNKGKGAEKVRPSIRANEGKGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family [H]

Homologues:

Organism=Homo sapiens, GI15431293, Length=180, Percent_Identity=52.2222222222222, Blast_Score=167, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17541432, Length=180, Percent_Identity=48.3333333333333, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323057, Length=178, Percent_Identity=48.876404494382, Blast_Score=158, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6323769, Length=178, Percent_Identity=48.876404494382, Blast_Score=158, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678 [H]

Pfam domain/function: PF00827 Ribosomal_L15e [H]

EC number: NA

Molecular weight: Translated: 22589; Mature: 22458

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYV
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCEE
IVRVRVRKGGRKRPRWKGGRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVG
EEEEEECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEHHHEECC
EDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAE
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHH
KVRPSIRANEGKGK
HHCCCCCCCCCCCC
>Mature Secondary Structure 
GMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYV
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCEE
IVRVRVRKGGRKRPRWKGGRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVG
EEEEEECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEHHHEECC
EDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAE
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHH
KVRPSIRANEGKGK
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]