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The map label for this gene is 18977244

Identifier: 18977244

GI number: 18977244

Start: 846441

End: 846818

Strand: Reverse

Name: 18977244

Synonym: PF0872

Alternate gene names: NA

Gene position: 846818-846441 (Counterclockwise)

Preceding gene: 18977245

Following gene: 33359519

Centisome position: 44.38

GC content: 40.21

Gene sequence:

>378_bases
TTGACTAGAATAAAAGATATTGTAGAGAAACGAATACATCACGCGGCTTGTGATAGACCCCTAACAGCAATAGACTTTCC
ACACCAAGATCCGATTGAAAAGAGGGTTGAACTTGCAAAGTTCATTAGAAGTCTGGAGGATCTAGGAGTTACCGCATACT
TGATAGCTGAGATGACAGATCTAGATAGATATTCAGAGGAGCACTATTTAGTTAGTGGTATTATTATGCTCCACTACTTC
ATGCATGAGGGTAGGATGATTAGGGCAATTCAGATCTTTAAGATGAGGGGAACAAAACACGACCCTAACCTAAAATTACT
TGAGTTTACAGACCATGGGTTGGTGGTATACAACAAATCTCCGTTCGAGGTCGAATGA

Upstream 100 bases:

>100_bases
TTCAATATATGCCTACGTAAACACCTGGAAGATTATTTTATATGACCTTGGCCCTGTTCTGTGGAGAGAGAGCACTAAGG
TTCCCACTTGGAGGAGCGTT

Downstream 100 bases:

>100_bases
TATGGACAAGCCTGAAGAAATTTTAAATGAAAAAGATATAATCAAACGAGCCTACAAGTTTGGATTTTATGTTGGATTAC
ATGGCCATACAGACTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Circadian Clock Protein KaiC; ATPase RecA Superfamily; RecA Family AAA ATPase; Recombinase

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTRIKDIVEKRIHHAACDRPLTAIDFPHQDPIEKRVELAKFIRSLEDLGVTAYLIAEMTDLDRYSEEHYLVSGIIMLHYF
MHEGRMIRAIQIFKMRGTKHDPNLKLLEFTDHGLVVYNKSPFEVE

Sequences:

>Translated_125_residues
MTRIKDIVEKRIHHAACDRPLTAIDFPHQDPIEKRVELAKFIRSLEDLGVTAYLIAEMTDLDRYSEEHYLVSGIIMLHYF
MHEGRMIRAIQIFKMRGTKHDPNLKLLEFTDHGLVVYNKSPFEVE
>Mature_124_residues
TRIKDIVEKRIHHAACDRPLTAIDFPHQDPIEKRVELAKFIRSLEDLGVTAYLIAEMTDLDRYSEEHYLVSGIIMLHYFM
HEGRMIRAIQIFKMRGTKHDPNLKLLEFTDHGLVVYNKSPFEVE

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14709; Mature: 14578

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIKDIVEKRIHHAACDRPLTAIDFPHQDPIEKRVELAKFIRSLEDLGVTAYLIAEMTD
CCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LDRYSEEHYLVSGIIMLHYFMHEGRMIRAIQIFKMRGTKHDPNLKLLEFTDHGLVVYNKS
HHHHCCCHHHHHHHHHHHHHHHCCCEEHHHHEEHHCCCCCCCCEEEEEECCCCEEEECCC
PFEVE
CCCCC
>Mature Secondary Structure 
TRIKDIVEKRIHHAACDRPLTAIDFPHQDPIEKRVELAKFIRSLEDLGVTAYLIAEMTD
CHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LDRYSEEHYLVSGIIMLHYFMHEGRMIRAIQIFKMRGTKHDPNLKLLEFTDHGLVVYNKS
HHHHCCCHHHHHHHHHHHHHHHCCCEEHHHHEEHHCCCCCCCCEEEEEECCCCEEEECCC
PFEVE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA