| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977220
Identifier: 18977220
GI number: 18977220
Start: 821386
End: 822156
Strand: Reverse
Name: 18977220
Synonym: PF0848
Alternate gene names: NA
Gene position: 822156-821386 (Counterclockwise)
Preceding gene: 18977224
Following gene: 18977219
Centisome position: 43.08
GC content: 41.25
Gene sequence:
>771_bases ATGAAGAAAAACATGATTGGATTTGGAATTCTACTATTCCTTTTTATTTTCATGGCCTATAAAGCTCTTGAAAGTCCCGA ACCCCAGAAAGTTATTGCCAAGGAATATTTCATCTCTACTTATCGGGGCTATGTAGCTGGGTACGTTGATGAAGTTGTTG CCCTCCACGCATACCTGATAACTCCAGGGGATCAAGATTTTAGAGGGACTATTGGAGTCAGAAATCTCCCTTCCTGCCTT GATTTTAAAGATATAGGAGTTAGCAAATTCAGCTATCCAGGAGCAACGGTGTTTGACATCATAGTAACATTAAGGCTCAA AGAGCCTGGCCACTGCGTTATGGATAAAGCCTATGTAATAATTTGGAGGAACAACGCCACAAAGAAAGCTCCTCTCGGAA CAATTGAGTTCGACATCTTGGAGCCTTCAGAAGGAAAAACATTAGACATTCCAGCTTATGTCGAGGCTGTTGTTGGTCCA ACCCCAGGAGTTCCAAGACTTATGTATACAATTTCAAATCCCTTCAATGAGACCGTAGATATAGTGAACGTGAGTTTTAG AGTTCCAGGAATTAAGATTATTGACTCTGGGCCACGGGAAATACCTCCCAAAGGAATAGTTAACTTCACGGTAACTCTAA CGAACATATCCAAGCCAAATGATTTGTACGTTATTAAGCCACTCATAGTTTACAGGGTTAGAGAAAAGAGATATTCGATG CCTGCTCCACCCTGCTATCGGATAACTATCCCTGAGAACCTTAAACCCTAA
Upstream 100 bases:
>100_bases AGTAAAATTTATAAAATTTACAAGGTATAATATGGACATAATATACTCAGTGATAGTAGATGATCAATAAAAAGCATCTA TAGAAGATAGGGGAGCACTC
Downstream 100 bases:
>100_bases TTAATTTCTTTTCCTAAAGTTTAAATCGATCTATCCCAATTCCTCAGTGTATGGTAGTCTGGAAGGATGGAAAGTTGGGC CTTCCCATACCTGAAGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKKNMIGFGILLFLFIFMAYKALESPEPQKVIAKEYFISTYRGYVAGYVDEVVALHAYLITPGDQDFRGTIGVRNLPSCL DFKDIGVSKFSYPGATVFDIIVTLRLKEPGHCVMDKAYVIIWRNNATKKAPLGTIEFDILEPSEGKTLDIPAYVEAVVGP TPGVPRLMYTISNPFNETVDIVNVSFRVPGIKIIDSGPREIPPKGIVNFTVTLTNISKPNDLYVIKPLIVYRVREKRYSM PAPPCYRITIPENLKP
Sequences:
>Translated_256_residues MKKNMIGFGILLFLFIFMAYKALESPEPQKVIAKEYFISTYRGYVAGYVDEVVALHAYLITPGDQDFRGTIGVRNLPSCL DFKDIGVSKFSYPGATVFDIIVTLRLKEPGHCVMDKAYVIIWRNNATKKAPLGTIEFDILEPSEGKTLDIPAYVEAVVGP TPGVPRLMYTISNPFNETVDIVNVSFRVPGIKIIDSGPREIPPKGIVNFTVTLTNISKPNDLYVIKPLIVYRVREKRYSM PAPPCYRITIPENLKP >Mature_256_residues MKKNMIGFGILLFLFIFMAYKALESPEPQKVIAKEYFISTYRGYVAGYVDEVVALHAYLITPGDQDFRGTIGVRNLPSCL DFKDIGVSKFSYPGATVFDIIVTLRLKEPGHCVMDKAYVIIWRNNATKKAPLGTIEFDILEPSEGKTLDIPAYVEAVVGP TPGVPRLMYTISNPFNETVDIVNVSFRVPGIKIIDSGPREIPPKGIVNFTVTLTNISKPNDLYVIKPLIVYRVREKRYSM PAPPCYRITIPENLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28696; Mature: 28696
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNMIGFGILLFLFIFMAYKALESPEPQKVIAKEYFISTYRGYVAGYVDEVVALHAYLI CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE TPGDQDFRGTIGVRNLPSCLDFKDIGVSKFSYPGATVFDIIVTLRLKEPGHCVMDKAYVI CCCCCCCEEECCCCCCCCCCCHHHCCCCEECCCCCHHEEEEEEEEECCCCCEEECCEEEE IWRNNATKKAPLGTIEFDILEPSEGKTLDIPAYVEAVVGPTPGVPRLMYTISNPFNETVD EECCCCCCCCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCCCCEEEEEECCCCCCCEE IVNVSFRVPGIKIIDSGPREIPPKGIVNFTVTLTNISKPNDLYVIKPLIVYRVREKRYSM EEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCC PAPPCYRITIPENLKP CCCCEEEEECCCCCCC >Mature Secondary Structure MKKNMIGFGILLFLFIFMAYKALESPEPQKVIAKEYFISTYRGYVAGYVDEVVALHAYLI CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE TPGDQDFRGTIGVRNLPSCLDFKDIGVSKFSYPGATVFDIIVTLRLKEPGHCVMDKAYVI CCCCCCCEEECCCCCCCCCCCHHHCCCCEECCCCCHHEEEEEEEEECCCCCEEECCEEEE IWRNNATKKAPLGTIEFDILEPSEGKTLDIPAYVEAVVGPTPGVPRLMYTISNPFNETVD EECCCCCCCCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCCCCEEEEEECCCCCCCEE IVNVSFRVPGIKIIDSGPREIPPKGIVNFTVTLTNISKPNDLYVIKPLIVYRVREKRYSM EEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCC PAPPCYRITIPENLKP CCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA